Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01160 ATGTCTGAGAGTGCTGAAGCTGGGATAGGTGGAATACATATTTCTTTGTTGTCTGACTTGATGGATTTGCAATTGTCAGGCATTGATGAACCTCAAAAACCATTGACACCTCTTATCCCAAAAAGCAAATTCTTCATCCCAAAGATTTTGCTAGATATTTTTCAAGATTCGGCCTTTAGTTCAAAGATTACAGTTCATCAAGATGGTCAAGTCACGTTTATGGGTACTGCAATTGAGATGAAAGATCTTCTTTCTGTAGTTGCTGACTCGTACTTGTCAGAACACATGCGTAAGGGTGAAAAACAATCTATGGTTGTTCCACACTTCAGCAGGATGATTTTCAATGAAGTAGAAGTTAGAAGTCATTCCTCCACATTGGATATTCACTCTACATTGACTGTTCCTTTAAGAAGTCCTGAGAAAGTCGAAGTCAAGCCAACGCAAAAAAAGAACAAGAAAGCAGCCAGAGAGAGGGATCTCTACAAGAAGAACTACTTACATGCATGTGAGAGTCTTCTCTCCTTAATGGTTGACAAGAGGCAACACCGCAAAACCGCTATTCTTTCTCTGAAGAAATCTGGCCCTAAGCTTCCTGAGCTCCTCACACAATTTTCTGTTGGCATCGCTGGTACTGGCCTTGCTGTCCTGCTATCTGTGATCTGTAAGCTAGCTTGCGGAAGGGTTCCCTTTTGTGCATTCAACACTGGGTTCGGATTTGGGCTGGTTTGGCTTTCATGGGGAGTTAATAAGCTAAGGGATACAATTGTCAGCATAAACAAGAATGCAGGAAAGCTAGAGCTGAAAGATGAGGACATTATTCAAAAGGTTGATAAGAACCTAAGAGAGGTTTACTTCAGAGCTGTAGCATTGCTAGCGGTGGCAGTGCTACGGTTTGCTTGA 900 0.4189 MSESAEAGIGGIHISLLSDLMDLQLSGIDEPQKPLTPLIPKSKFFIPKILLDIFQDSAFSSKITVHQDGQVTFMGTAIEMKDLLSVVADSYLSEHMRKGEKQSMVVPHFSRMIFNEVEVRSHSSTLDIHSTLTVPLRSPEKVEVKPTQKKNKKAARERDLYKKNYLHACESLLSLMVDKRQHRKTAILSLKKSGPKLPELLTQFSVGIAGTGLAVLLSVICKLACGRVPFCAFNTGFGFGLVWLSWGVNKLRDTIVSINKNAGKLELKDEDIIQKVDKNLREVYFRAVALLAVAVLRFA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01160 299 PANTHER OS05G0143300 PROTEIN 1 299 - -
Cca02g01160 299 PANTHER PROTEIN, PUTATIVE-RELATED 1 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01160 Cca-Chr2 29062308 29067433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01160 - - gmx:100800200 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01160 02 29062308 29067433 Cca02g01160 02 29062308 29067433 ECH
Cca03g02085 03 41111380 41116536 Cca02g01160 02 29062308 29067433 PCT