Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02078 ATGTTAGTTGCTAGTTACCCCCACGCGTTCTCATATTCTCACAGCCCTTCCGACAATGACCCCTCCGGCGCCGCCCAAATCAGAATCCACAGTCTCTGGAAAACCCTAAGCGCCAAATCCGAATCCATCATCGAGACCTACCGCCGCGACCTCCAGGAATTCGGCACCGGCCTCAAGAAGGAGATAGAGGTTGCTCACGGTTCCCTCGAGACGGTGGGCAACGCCATTGACCACTTCGGGAACACCGTCGTCAAGGGAACCGCTCAGATCATGTCTCACGGCAAGGACGCCATCCTCCATTCCGACGACGACAAAAAAATTAACAACAGCACCGGAAAGGGTTTCAATTCGAAACGGTATAGTAGGTTTGACGCTCAGGTTCGTGCCATTCAGGGTGACGTTAGCACTTACTCCGAAGTGCCCCAGGATTTGGACGAGTTTAATAACTGGAAGTCGGGGTTTTCGCTGGAAGGGAAGTGGGACGAAATGGAAGGGTTTCTGAGAGAGAATGAGGCTATGGAGAGTGTTTATAAAAGGGCGAGGCTCGTGAGGAAGATGTCCAGGGAAGAGGAGAATTTGAGTTGGGATCTtgatgatgatgatgatgatgatgatgatgGAGATGTGGGTGGTGATGGAACAAAGAGGTCGAATGTGGAAGAGGTGCAAAGCAAGGGACTCGGTAACAAGAAGGATGAGTGTGTTGAAGAATCAAAAGTTGACAAGAGTGAAGAGGCTGTTGAGAATAAGGGTGATGGGAGCAAGAAAAGTAGTATTCATGAAGTGGATAACACTGGGAATAGAAATGATTCTATTTCCGGTGTGGATTCTGATGAGAAGCTGGTAATGAAAAGGAAGGTTGATGATGGAAAAGCTCCACCGGTTGCAAGTCAGCACTTGGGGAATgagaatgagaaggaggaggaggaggactttgaatgggatgagattgagaatTTTAGTAGAATTGACGGTGAAGGGAAGGGGGCTAGGACGGGTAGCCCAAGCAAAGTTGATTTGCGAAAGCGCCTCAGTGTTCCACAAGAACAAGAAGATGAAGACTTGAGTTGGGACATTGAAGATAATGATGAGCCTGCTAAGGCATGA 1107 0.4562 MLVASYPHAFSYSHSPSDNDPSGAAQIRIHSLWKTLSAKSESIIETYRRDLQEFGTGLKKEIEVAHGSLETVGNAIDHFGNTVVKGTAQIMSHGKDAILHSDDDKKINNSTGKGFNSKRYSRFDAQVRAIQGDVSTYSEVPQDLDEFNNWKSGFSLEGKWDEMEGFLRENEAMESVYKRARLVRKMSREEENLSWDLDDDDDDDDDGDVGGDGTKRSNVEEVQSKGLGNKKDECVEESKVDKSEEAVENKGDGSKKSSIHEVDNTGNRNDSISGVDSDEKLVMKRKVDDGKAPPVASQHLGNENEKEEEEDFEWDEIENFSRIDGEGKGARTGSPSKVDLRKRLSVPQEQEDEDLSWDIEDNDEPAKA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02078 368 MobiDBLite consensus disorder prediction 193 208 - -
Cca03g02078 368 PANTHER SYNAPSE-ASSOCIATED PROTEIN 17 64 - -
Cca03g02078 368 PANTHER SYNAPSE-ASSOCIATED PROTEIN 64 178 - -
Cca03g02078 368 PANTHER PROTEIN, PUTATIVE-RELATED 179 362 - -
Cca03g02078 368 PANTHER PROTEIN, PUTATIVE-RELATED 17 64 - -
Cca03g02078 368 MobiDBLite consensus disorder prediction 209 263 - -
Cca03g02078 368 MobiDBLite consensus disorder prediction 335 350 - -
Cca03g02078 368 PANTHER PROTEIN, PUTATIVE-RELATED 64 178 - -
Cca03g02078 368 PANTHER SYNAPSE-ASSOCIATED PROTEIN 179 362 - -
Cca03g02078 368 MobiDBLite consensus disorder prediction 273 292 - -
Cca03g02078 368 MobiDBLite consensus disorder prediction 189 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02078 Cca-Chr3 41033658 41034945 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02078 - - gmx:102665065 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02078 03 41033658 41034945 Cca03g02078 03 41033658 41034945 ECH
Cca03g02078 03 41033658 41034945 Cca02g01166 02 29158871 29160560 PCT