Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02073 ATGTCAGGATTTTCTCCCACCATCGGGACTATAACATATGCTTGCCTTCAGATTGTGGTCACAGGTGGAGCAGCCCTCATAGATAAAGCTGGCAGGAAGCCCCTACATCTGATATCTGGATCGGGATTGGTCGCAGGATGTGTATTTGCAGCAGTTGCATTCTATCTCAAGGTTCACGAGGTGGGTGCTGCAGCAGTCCCAGCACTTGCCGTAACAGGCATACTGGTTTACATAGGAGCATTTTCAATTGGAATGGAAGCAATTCCATGGGTTGTGATGTCTGAGATATTTCCGGTCAATATTAAAGGGATAGCAGGAAGTGTGGCCACATTAACGAACTGGGTTGGTGCATGGTTATGTTCCTATACTTTCAACTTCCTCAGGAGCTGGAGCTCCTATGAAACCAAGGGGAAAAGCTTGGAACAATTACAAGCGGCCATTAACGCATAG 450 0.4689 MSGFSPTIGTITYACLQIVVTGGAALIDKAGRKPLHLISGSGLVAGCVFAAVAFYLKVHEVGAAAVPALAVTGILVYIGAFSIGMEAIPWVVMSEIFPVNIKGIAGSVATLTNWVGAWLCSYTFNFLRSWSSYETKGKSLEQLQAAINA 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02073 149 SUPERFAMILY MFS general substrate transporter 8 142 IPR036259 -
Cca03g02073 149 Pfam Sugar (and other) transporter 3 129 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca03g02073 149 PANTHER - 2 147 - -
Cca03g02073 149 ProSitePatterns Sugar transport proteins signature 1. 23 40 IPR005829 GO:0016021|GO:0022857|GO:0055085
Cca03g02073 149 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 2 147 - -
Cca03g02073 149 Gene3D MFS general substrate transporter like domains 1 148 IPR036259 -
Cca03g02073 149 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 149 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02073 Cca-Chr3 41012208 41013541 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02073 2 147 Organic Solute Cotransporters AT3G05150 46.471 7.05e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02073 K03444 - gmx:100785248 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02073 03 41012208 41013541 Cca03g02979 03 51230784 51235464 ECH
Cca03g02073 03 41012208 41013541 Cca03g02073 03 41012208 41013541 ECH