Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02051 ATGGCATCGAAACAGGGTGTGAAATCGAGAAGATTCGGGTTAGGTGGCTCAAAAGGTGCCAATTCGCCTTCGTCTTCGACCACATCGTCGTCTAAGCAGTTTCAGGAGACATCGGTTGATGGCCAGAGCTCGCCGGCGTCTTCGTCGGCTCGGAGTAAGCAGCAGCATTTTAATTCAGAAGCTGCTGCGGCTGCGCGTTTGGCTGCGCAGAGAGCGAAAGAAAATGTCACGGTGACGGTCCGATTTCGGCCTCTGAATCCAAGGGAAATTCGTCAAGGGGAGGAGATTGCTTGGTATGCAGACGGAGAAACTATAGTGCGCAATGAGTATAACCCGTCCATAGCATATGCATACGATCGTGTCTTTGGTCCCACAACCACAACTCGTCAGGTATATGATGTTGCTGCTCAGCATGTCGTCAGTGGTGCTATGGAGGGCATCAATGGTACGGTATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATCCCCCTTGCCGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCCAAATCGAGAGTTTCTCCTTCGAGTTTCATACTTGGAAATCTACAATGAGGTAGTTAATGACTTATTAAATCCAGCAGGACAGAACTTAAGAATCAGAGAGGATGCTCAGGGAACCTATGTTGAGGGAATAAAGGAAGAGGTTGTACTCTCCCCTGCTCATGCACTGTCCCTTATTGCAGCTGGAGAAGAGCACAGGCATGTTGGGTCCACAAACTTCAACCTACTCAGCAGCAGGAGCCATACAATATTTACCCTGACTATAGAGAGTAGTCCATGTGGTGAAAATAGTGAAGGAGAAGCAGTAACACTGTCACAACTGAATCTCATTGATCTAGCAGGTTCTGAGAGCTCGAAAGCTGAAACAACTGGCATGAGAAGGAGAGAAGGATCTTATATCAATAAAAGTCTGCTAACTCTTGGAACTGTTATTTCAAAATTGACTGAAGATAAAGCTAGTCACATACCTTACAGGGATTCCAAATTGACTAGAGTACTTCAGTCTTCGCTCAGTGGTCATGGTCGTGTTTCTCTTATTTGCACTGTAACCCCTTCCTCAAGTAGTACTGAAGAGACGCATAATACATTGAAGTTTGCTCACCGGGCAAAGTACATTGAAATACGAGCAGCACAAAACAAGATAATTGATGAGAAGTCACTTATCAAGAAATACCAACAAGAGATTCAATCCTTAAAGGAAGAATTGGAACAATTAAAGAGAGGTATCGTCACAGTTCAACCAAAAGATATTGGGGATGATGACATTGAGCTCCTAAAACAGAAGTTAGAAGATGGTCAAGTTAAGTTGCAATCCAGATTGGAACAAGAAGAAGAAGCTAAAGCTGCTTTGTTAGGTAGAATTCAACGGTTGACTAAGTTGATTTTGGTCTCTACAAAAGCATCACCGACAACAAGATTTCCTAACAGGCCTGGTCCTCGTAGAAGACATTCCTTTGGGGAAGAAGAGCTGGCATACCTTCCATACAAAAGACGGGATTTAATCTTAGAAGAGGAAAATGTTGATTTATACGTTAATCTGGAGGGAAATGCTTCAACAGCTGATGAATCTTTTAAGGGTGAGAAAAAGATGAAGAAACATGGACTGCTAAATTGGTTGAAGTTACGTAAACGAGATAGTGCATTGACAGGCACAAGTGATAAATCCAGTGGAGCAAAATCTATTAGCACACCTTCTACACCTCAAGCAGAAAGTAGTAATCATGTGGAGTCCAGATTTTCTCATTCACAACCTGCAGAAAGCTCTCCCTCTGCTGATCTTGCATCAGAGGCAAGAGAGGATAAATATATTCATGAGGATAGTTTATTGGGAGAAGAGACTCCTTTGACAAGCATCAAATCAGTTGATCAGATTGATCTTCTGAGGGAGCAGCACAAAATTTTATCTGGAGAAGTGGCACTTCATTCAAGTGCTTTGAAGAGGCTGTCTGACGAAGCAACAAGAAATCCTCATGGTCAGATTCATGTGGAGATGAAAAGGTTGAAAGATGAAATTACGACAAAGAATGAACAAATAGATTTGCTGGAAAAGCAAATTTCTAATTCTTTCATTGCTTCAGATAAAACAGAAAAGTCGGGAGCATTGCAGCAGACTGTTGCTGAGCTGATGGCACAATTAAACGAGAAATCCTTTGAACTAGAGGTCAAAGCAGCAGATAACCGTATAATTCAAGAACAGCTTAATCAGAAGATTTGTGAATGTGAAAGCCAGCAAGAAACTATTGCCTCTCTGAAACAGCAACTAGCAGATGCATTGGAGTTGAGAAATTTCAGCCCTGTACATTCACAAAATTTCTCTGTATCCAAAGACTATAGTAGTGAACTTCACATTGACAAGGGGAATGTGCTGGTAAACAATTCCAATGAAGGGATTCATTTGCAAGCACAGATAAGTGAGATAGAAGAGCTGAAGCAGAGGGTGGCAGAAATAACAGAAGCAAAGGAGCAGTTAGAATTTAGAAATCAGAAACTGGCAGAAGAGAGTTCATATGCTAAAGGGCTTGCTTCAGCTGCTGCTGTGGAGCTTAAGGCACTGTCAGAAGAAGTTGCCAAACTCATGAACCAGAACGAGAGACTAGCTGCTGAGCTAGCCGCATCCAAGAATTCACCCGCTGAACGTAGAACTAGTGGCACAGTCCAAAATGGACGAAGGGAGAGTCATGTTAGAGGTAGACGAAATGATCAGGGTGGATCAAATTCCAATATCAAGAGAGAATTAGCCTTGAGCAAAGAAAGGGAACTTTCATATGAAGCTGCCCTTTTAGAGAAAGATCAGAAAGAGGCCGAACTTCAGAGAAAGATTGAGGAGTCAAAGCAAAGAGAAGCATACCTGGAAAATGAACTTGCCAACATGTGGGTCCTTGTGGCAAAGCTAAAAAAGTCACAAGGACCTGAAACTGATGTTTCAGGATCGACTAGAGAGAGTTTGAAGTTGGATGGTTTTGACGTTTGA 3036 0.4259 MASKQGVKSRRFGLGGSKGANSPSSSTTSSSKQFQETSVDGQSSPASSSARSKQQHFNSEAAAAARLAAQRAKENVTVTVRFRPLNPREIRQGEEIAWYADGETIVRNEYNPSIAYAYDRVFGPTTTTRQVYDVAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTVISKLTEDKASHIPYRDSKLTRVLQSSLSGHGRVSLICTVTPSSSSTEETHNTLKFAHRAKYIEIRAAQNKIIDEKSLIKKYQQEIQSLKEELEQLKRGIVTVQPKDIGDDDIELLKQKLEDGQVKLQSRLEQEEEAKAALLGRIQRLTKLILVSTKASPTTRFPNRPGPRRRHSFGEEELAYLPYKRRDLILEEENVDLYVNLEGNASTADESFKGEKKMKKHGLLNWLKLRKRDSALTGTSDKSSGAKSISTPSTPQAESSNHVESRFSHSQPAESSPSADLASEAREDKYIHEDSLLGEETPLTSIKSVDQIDLLREQHKILSGEVALHSSALKRLSDEATRNPHGQIHVEMKRLKDEITTKNEQIDLLEKQISNSFIASDKTEKSGALQQTVAELMAQLNEKSFELEVKAADNRIIQEQLNQKICECESQQETIASLKQQLADALELRNFSPVHSQNFSVSKDYSSELHIDKGNVLVNNSNEGIHLQAQISEIEELKQRVAEITEAKEQLEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNQNERLAAELAASKNSPAERRTSGTVQNGRRESHVRGRRNDQGGSNSNIKRELALSKERELSYEAALLEKDQKEAELQRKIEESKQREAYLENELANMWVLVAKLKKSQGPETDVSGSTRESLKLDGFDV 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02051 1011 Gene3D Kinesin motor domain 66 425 IPR036961 -
Cca03g02051 1011 PRINTS Kinesin heavy chain signature 146 167 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02051 1011 PRINTS Kinesin heavy chain signature 260 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02051 1011 PRINTS Kinesin heavy chain signature 295 313 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02051 1011 PRINTS Kinesin heavy chain signature 344 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02051 1011 Coils Coil 944 975 - -
Cca03g02051 1011 MobiDBLite consensus disorder prediction 988 1011 - -
Cca03g02051 1011 MobiDBLite consensus disorder prediction 569 618 - -
Cca03g02051 1011 ProSiteProfiles Kinesin motor domain profile. 75 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02051 1011 SMART kinesin_4 73 402 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02051 1011 MobiDBLite consensus disorder prediction 1 60 - -
Cca03g02051 1011 Coils Coil 396 430 - -
Cca03g02051 1011 Pfam Kinesin motor domain 81 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02051 1011 Coils Coil 448 482 - -
Cca03g02051 1011 Coils Coil 755 782 - -
Cca03g02051 1011 MobiDBLite consensus disorder prediction 572 612 - -
Cca03g02051 1011 CDD KISc_CENP_E 75 394 - -
Cca03g02051 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 429 IPR027417 -
Cca03g02051 1011 Coils Coil 821 855 - -
Cca03g02051 1011 PANTHER CENTROMERE PROTEIN E 53 1003 - -
Cca03g02051 1011 Coils Coil 863 897 - -
Cca03g02051 1011 MobiDBLite consensus disorder prediction 906 920 - -
Cca03g02051 1011 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 53 1003 - -
Cca03g02051 1011 MobiDBLite consensus disorder prediction 18 59 - -
Cca03g02051 1011 Coils Coil 686 706 - -
Cca03g02051 1011 MobiDBLite consensus disorder prediction 891 933 - -
Cca03g02051 1011 ProSitePatterns Kinesin motor domain signature. 294 305 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02051 Cca-Chr3 40714329 40736261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02051 1 724 Miscellaneous Gene Families AT5G06670 69.041 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02051 K11498 - gmx:100815027 1770.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02051 03 40714329 40736261 Cca03g02051 03 40714329 40736261 ECH
Cca03g02051 03 40714329 40736261 Cca02g00722 02 17123557 17148647 PCT