Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00722 ATGGCACCGAAACGAAGCGCGAACGCGAAGTCGAAGTCGAAGGGAGTAGTGTTTAGCGGCTCCAGAGCGGCGAATtcgccttcgtcttcgacgacgtcgtcgtcgAAACTGTTTCTAGAAACTTCCGTCGATGGCCTGAGCTCGCCTGCGTCTTCGTCGGCTCGGAGCAAGACACCGTACTCGTTTTCCGAGAGCGTGCCTTTGGACGCGAAGGAAAACGTGACCGTTACGGTGCGGTTTCGTCCTCTGAATCCCAGGGAAATTCGTCAGGGAGAGGAGATAGCGTGGTATGCTGATGGCGAAACTTTGGTGCGGAGCGAGTATAACCCGTCCCTCGCGTATGCGTACGACCGTGTCTTTGGTCCCACAACTACAACTCGCCAGGTCTATGATGTTGCTGCTCAACATATTATTAGTGGTGCTATGGAGGGCATCAATGGTACAATATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCAGGAATTATACCTCTAGCTGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCTGAACAGAGAGTTTCTTCTTCGAGTTTCGTACTTGGAGATCTACAACGAGGTGGTTAATGACTTATTAAATCCAGCTGGACAGAACTTAAGAATCAGAGAGGATGCTCAGGGAACCTTTGTTGAGGGAATAAAGGAAGAAGTTGTACTCTCCCCTGCTCATGCACTGTCTCTTATAGCTGCTGGTGAAGAGCACAGACATGTTGGGTCCACAAGCTTCAACCTACTGAGCAGCAGGAGCCATACAATATTTTCCCTGACTATAGAGAGTAGTCCATGTGGTGAAAATAGTGAAGGTGAAGCAGTAACACTGTCTCAACTGAACCTCATCGATCTGGCAGGTTCTGAGAGCTCAAGGGCTGAAACAACTGGCATGAGAAGGAGAGAAGGATCTTACATCAATAAAAGTCTTCTAACGCTTGGAACTGTTATTTCAAAATTGACTGAAGGCAGAGCTAGTCACGTACCCTATAGAGACTCCAAATTGACTAGAATACTTCAGTCTTCACTCAGTGGTCAGGGACGTATATCTCTCATTTGCACTGTAACACCTTCATCAAGTACCGCTGAAGAGACACATAATACATTGAAGTTTGCTCACCGGGCAAAGCTCATTGAAATACAAGCAGCCCAGAACACAATAATTGATGAAAAGTCACTTATCAAGAAATACCAACATGAGATTCAGTGCTTAAAGGAAGAATTGGAACAAATGAAGCAGGGTATTGTCTCAGTTCCACAAAAAGAAACCGGTGAAATTGACTTTGTGCTCCTAAAACAAAAGCTAGAAGATGGTCAAGTCAAGTTGCAATCAAGATTGGAAGAAGAAGAAGAAGCTAAAGCTGCTTTATTAGGAAGAATTCAACGATTGACTAAGTTAATTTTGGTCTCCACTAAAGCATCACACTCAACTAGATTTTCTAACCGACCTGGTCCTCGTAGAAGACATTCCTTTGGGGAAGAAGAGTTGGCATACCTTCCATACAAAAGGAGGGATTTAATCTCAGATGACGAAAACACTGATATGCATGTTAATTTAGAGGGAAATGCTGAAACAGCTGATGATTCTTTTAAGGAGGAGAAAAAGACAAAGAAACACGGGTTACTAAATTGGTTGAAGATACGGAAACGAGAAACTGGGTTAAGTGCCTTTTCAGGCACTAGTGATAAATCATGTGGAGCAAAATCTGTTAGCCCACCTTCCACTCCTCAAGCAGAATCTAGTAATTGTGCAGAGTCCAGACGTTCCCATTCTCTACCTGCACAAAGCTCTCCATCCGCAGCAAGGGAGGATAAAGAGGATAGTTTATTGGGACCAGAGACACCTTTGATAAGCGTTAAATCAGTTGATGAGATTGATCTTTTGAGGGAGCAACAAAAAATTCTGTCAGAAGAAGTGGCTCTTCATTCAAGTGCTTTAAAGAGATTATTGCAGGAAGCTGCAAGAAATCCTCGGGATCAGATTCATACTCTCACCGAGCTGATGACACAATTAAATGAAAAATCCTTTGAACTGGAGGTCAAAACAGCAGATAACCATATAATTCAAGAACAGCTTAATCAGAAGATCCATGAATGTCAAAGCCTTCAAGAAACAATTGGCTCTCTGAAACAGCAGCTTGCTGATGATGCATTAGAGTTTGGAAACATGAGGCATGTATTCAATCATTCTCAACATTTCTCTGTAACCAAAGACTACAACGGTGAACCTCACCTTGAGGGGGAAGGTGGCATGATAACCAATACCAATGAAAAGATTCTTTTACAGGAGCAGGCAAGCGAGATAGAAGGGCTGAAGCAAAAGTTGGCGGAACTAAGCGAATCAAAAGAACAGTTAGAACTTCGAAATCAGAAACTGGCAGAAGAGAGTTCATATGCTAAAGGGCTAGCTTCGGCTGCTGCCGTTGAGCTTAAGGCATTGTCAGAACAAGTTGCTAAACTCATGAACCAGAAAGATAGATTACTGGCTGAGCTGGCTGCATCGAAGAATTCTCCCACCCAACGTAGAACTAGTGGAACAGTCCGAACTGGACGACGAGAGAGTCAAGTTAGACGAAATGATCAGGGTGCGTCAAACTCTGATATCAAGAGAGAACTGGCCTTGAGTAAAGAAAGGGAACTTCAATATGAAGCTGCCCTTTTAGATAGGGATCGTAATGAGGCTGATCTTCAAAAGAAGATTGAAGAATCAAAGCAAAGAGAAGCATACCTGGAAAATGAGCTTGCCAACATGTGGGTTCTTGTAGCAAAGCTGAAAAAGTCACAGGGAAATGAAATTGATGTTCAACATTTGATATGA 2859 0.4278 MAPKRSANAKSKSKGVVFSGSRAANSPSSSTTSSSKLFLETSVDGLSSPASSSARSKTPYSFSESVPLDAKENVTVTVRFRPLNPREIRQGEEIAWYADGETLVRSEYNPSLAYAYDRVFGPTTTTRQVYDVAAQHIISGAMEGINGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETLNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTFVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTSFNLLSSRSHTIFSLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSRAETTGMRRREGSYINKSLLTLGTVISKLTEGRASHVPYRDSKLTRILQSSLSGQGRISLICTVTPSSSTAEETHNTLKFAHRAKLIEIQAAQNTIIDEKSLIKKYQHEIQCLKEELEQMKQGIVSVPQKETGEIDFVLLKQKLEDGQVKLQSRLEEEEEAKAALLGRIQRLTKLILVSTKASHSTRFSNRPGPRRRHSFGEEELAYLPYKRRDLISDDENTDMHVNLEGNAETADDSFKEEKKTKKHGLLNWLKIRKRETGLSAFSGTSDKSCGAKSVSPPSTPQAESSNCAESRRSHSLPAQSSPSAAREDKEDSLLGPETPLISVKSVDEIDLLREQQKILSEEVALHSSALKRLLQEAARNPRDQIHTLTELMTQLNEKSFELEVKTADNHIIQEQLNQKIHECQSLQETIGSLKQQLADDALEFGNMRHVFNHSQHFSVTKDYNGEPHLEGEGGMITNTNEKILLQEQASEIEGLKQKLAELSESKEQLELRNQKLAEESSYAKGLASAAAVELKALSEQVAKLMNQKDRLLAELAASKNSPTQRRTSGTVRTGRRESQVRRNDQGASNSDIKRELALSKERELQYEAALLDRDRNEADLQKKIEESKQREAYLENELANMWVLVAKLKKSQGNEIDVQHLI 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00722 952 MobiDBLite consensus disorder prediction 1 35 - -
Cca02g00722 952 CDD KISc_CENP_E 73 392 - -
Cca02g00722 952 PRINTS Kinesin heavy chain signature 293 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g00722 952 PRINTS Kinesin heavy chain signature 144 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g00722 952 PRINTS Kinesin heavy chain signature 342 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g00722 952 PRINTS Kinesin heavy chain signature 258 275 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g00722 952 Coils Coil 775 809 - -
Cca02g00722 952 Gene3D Kinesin motor domain 66 423 IPR036961 -
Cca02g00722 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 427 IPR027417 -
Cca02g00722 952 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 60 675 - -
Cca02g00722 952 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 677 949 - -
Cca02g00722 952 MobiDBLite consensus disorder prediction 570 612 - -
Cca02g00722 952 Coils Coil 907 927 - -
Cca02g00722 952 MobiDBLite consensus disorder prediction 570 629 - -
Cca02g00722 952 PANTHER CENTROMERE PROTEIN E 60 675 - -
Cca02g00722 952 PANTHER CENTROMERE PROTEIN E 677 949 - -
Cca02g00722 952 ProSiteProfiles Kinesin motor domain profile. 73 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g00722 952 Coils Coil 817 851 - -
Cca02g00722 952 MobiDBLite consensus disorder prediction 12 35 - -
Cca02g00722 952 SMART kinesin_4 71 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g00722 952 MobiDBLite consensus disorder prediction 845 883 - -
Cca02g00722 952 ProSitePatterns Kinesin motor domain signature. 292 303 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca02g00722 952 Pfam Kinesin motor domain 79 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g00722 952 Coils Coil 706 726 - -
Cca02g00722 952 Coils Coil 394 428 - -
Cca02g00722 952 Coils Coil 446 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00722 Cca-Chr2 17123557 17148647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00722 11 674 Miscellaneous Gene Families AT5G06670 70.939 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00722 K11498 - gmx:100809643 1528.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00722 02 17123557 17148647 Cca02g00722 02 17123557 17148647 ECH
Cca03g02051 03 40714329 40736261 Cca02g00722 02 17123557 17148647 PCT