Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02036 atgtacatgtatatatatgcaaatgtatGTTGTGGGTCTTTCTGGGTCTGCTTTGTTTGTAGGAAAGGACGCGCCTTGAGTTTGGAAACATCACAGGCTAAGGTGTTGCCACCGTTCAGCCCTTCTTCTACTCGAGATGGGAGATGGTATGAGGGAGAGAAAGCTATTCCGCTGAAGAAAAGAAGAGGGAGCTTCGAGGAGaataataatgctactcataataataagaagatgaaggcaaagatgaagacaaagatgaacaagaagtgttccacgcgtgatgaagatagcatgggagaggaagatgagggagaagaAACAAAAGTGGAAATGAATGTGAGTAAGAAGAGGGCAAGGGGAAGTGCACTCATGGAAGGTTCTAGGTGCAGTCGTGTGAATGGTAGGGGATGGAGGTGCTGCCAACAAACGCTGGTCGGTTACTCGCTGTGTGAGCATCACTTGGGGAAAGGAAGGTTAAGAAGCATGACAAGTGTTAGAAGCCGTTCTATTATTGCATCTAGTGCACCAAAGAAGGTGCACCACGTGCCTCTCCCTTCTCCTTCTTCTTCTCTTGAGAAGCAATCTGAGTGTGTCGTTGCTAATGCTGAGTCCTTTGTGGAGGACGAGAAGAAGCCAGAGATGATGACGATAACAAAGAAGAGGATGAAGCTTGGCATGGTGAAAGCGCGTTCTATAAGCAGCTTGCTGGGACAAACAAACACTCACATTGCCGCTGTAGTTCATGAGAATAATAGCAAGTAA 762 0.3885 MYMYIYANVCCGSFWVCFVCRKGRALSLETSQAKVLPPFSPSSTRDGRWYEGEKAIPLKKRRGSFEENNNATHNNKKMKAKMKTKMNKKCSTRDEDSMGEEDEGEETKVEMNVSKKRARGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIIASSAPKKVHHVPLPSPSSSLEKQSECVVANAESFVEDEKKPEMMTITKKRMKLGMVKARSISSLLGQTNTHIAAVVHENNSK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02036 253 MobiDBLite consensus disorder prediction 77 119 - -
Cca03g02036 253 ProSiteProfiles WRC domain profile. 123 167 IPR014977 -
Cca03g02036 253 PANTHER - 22 250 IPR031137 GO:0005634|GO:0006351|GO:0032502
Cca03g02036 253 PANTHER OS02G0773600 PROTEIN 22 250 - -
Cca03g02036 253 Pfam WRC 125 165 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02036 Cca-Chr3 40526527 40528866 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02036 - - gmx:100810559 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02036 03 40526527 40528866 Cca03g02036 03 40526527 40528866 ECH
Cca03g02036 03 40526527 40528866 Cca02g00732 02 17829961 17832687 PCT