Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00732 ATGAGGATCCGTAATAGGCAAAAGCCTTTCCCTCTCTTGCCGGTGACTCACTCAGATCCCAACCTGATCAACCGGTCACCGGTCATGGTGCAACTCAACGGTGCTACCACCACAGCCACACCCAAACCTTCTTGCACTCATGGTTCGGCCACTGCACCCTCACGCCTCTTGGATCGTCCTCAGCCGTTTGATCCACCGATCGGGAATCCCATCAACGGTTCTGATGCGTCCACCGGAGAAGCTGGCAGGCAGCACAAGAAGCAAGAGTCTTTGGTGGAAGATGGGAGAAGGGAAGAAGAGGGAAGGGGACAGAAGGGTAATGATACCAGGAAAGGAAGCTTCTCGTGCTCACAACAAACTCCAGCTGAGACATTTCCATCTTCAAACCCTCCTAAAGAAGATGGTGGATGGTGCGAGGGAGAAAAAGCTTTTCCTCTCAAGAAACGAAGAGGGAGAATGGAGAATGCAATGGAGGATAACAATAATGACAACAATgataatgatcacgataagaggagtttaaagatgaagatgaagacgaagataaaggcaaagatgaacaaaaaatgttcgcggcaagatgaaggagaagaagaagaggaagaggaggaggaggagtcgaaaagagagatgaaACCGGAAGCGAACGTTGGCAAGAAGAGGGCGAGGGGTGGTGCACTAATGGAAGGTTCAAGGTGCAGTCGTGTTAATGGAAGAGGATGGAGGTGTCTTCAACAAACCTTGGTTGGTTACTCTCTCTGCGAGCACCACTTGGGGAAGGGAAGGTTGAGGAGCATGACAAGTGTGAGGAACAAGTCCATTGGCacaacaacaacaacaaccactggtgcaacaaagaacaacaacaacaacaTGGTACAACTCGAATCTTCATCATCATCAGTCAAGCAAAGAACAAAGGGCGGCAATGATGCTGAAAACAATGATGAGAAGAAGCCATTGATGGTCACAAAGAAGAGGATGAAGCTTGGAATGGTGAAAGCTCGATCTATAAGCAGCTTGCTGGGACAAACCAACAACACTGAAATTGTGGCCGTAGCTGTGgatcatgatcatgatcatgataatgatattgataaCAAGTAA 1107 0.3966 MRIRNRQKPFPLLPVTHSDPNLINRSPVMVQLNGATTTATPKPSCTHGSATAPSRLLDRPQPFDPPIGNPINGSDASTGEAGRQHKKQESLVEDGRREEEGRGQKGNDTRKGSFSCSQQTPAETFPSSNPPKEDGGWCEGEKAFPLKKRRGRMENAMEDNNNDNNDNDHDKRSLKMKMKTKIKAKMNKKCSRQDEGEEEEEEEEEESKREMKPEANVGKKRARGGALMEGSRCSRVNGRGWRCLQQTLVGYSLCEHHLGKGRLRSMTSVRNKSIGTTTTTTTGATKNNNNNMVQLESSSSSVKQRTKGGNDAENNDEKKPLMVTKKRMKLGMVKARSISSLLGQTNNTEIVAVAVDHDHDHDNDIDNK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00732 368 ProSiteProfiles WRC domain profile. 227 271 IPR014977 -
Cca02g00732 368 MobiDBLite consensus disorder prediction 36 51 - -
Cca02g00732 368 MobiDBLite consensus disorder prediction 36 223 - -
Cca02g00732 368 MobiDBLite consensus disorder prediction 135 175 - -
Cca02g00732 368 MobiDBLite consensus disorder prediction 274 308 - -
Cca02g00732 368 MobiDBLite consensus disorder prediction 80 107 - -
Cca02g00732 368 MobiDBLite consensus disorder prediction 108 127 - -
Cca02g00732 368 Pfam WRC 229 269 IPR014977 -
Cca02g00732 368 PANTHER - 47 352 IPR031137 GO:0005634|GO:0006351|GO:0032502
Cca02g00732 368 MobiDBLite consensus disorder prediction 274 321 - -
Cca02g00732 368 PANTHER OS02G0773600 PROTEIN 47 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00732 Cca-Chr2 17829961 17832687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00732 - - gmx:102665471 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00732 02 17829961 17832687 Cca02g00732 02 17829961 17832687 ECH
Cca03g02036 03 40526527 40528866 Cca02g00732 02 17829961 17832687 PCT