Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02031 ATGAGCAGCGCCATCTTCAAAGCGGCAAACAGCAACAATCTCCATTCCTCTCTCAGGGCCGCACTCTTCCATTCCACTCCTCCCTTGCAACGCAAAAGGCGCAATTATTGGGACTCCAGAGGCAATAACCATTACTCCAGAAGGTTTAGAAGGATGCAAGCAAAACACAGAGTAATGCAGAGTGTCAACGATTATGCAGAATTCCTGTTTCAGAGCTGGAAGGAAGATACTGACAAGGAAGATCCATCATCAAGTCGAGGCACCTCATGGTTTAAAAAACAATATTCTGGTGGGGGCTCTAAAAGGTACAGGAATGGCAATCAAGGATCAAGTCATCAGTACAAAAGAGATCCTTTGTTTTGTGAAGATGATTTTGATGTTGAAACCATTTTCCGTTCTGCCTTTGGTGGGAATAGATTCTTCTATTGGTCCTTCATCAATGACGAAAATCCTCAGTGGAGGAGGTCTGAACGCTTTTCTAATTTTGAGAAATCTTGGAACTGGAGATATCGGAATGAAAATGATTATGACTCTTCATCCGAAACTGATAGTTCTGATTCAGATTTAGTTCCTGATAGATTAGCCCTCGGATTGAATGCTTCTGGTCCCCTTAAACTTGAAGATGTAAAAAATGCCTACCGGGTCTGTGCTCTAAAATGGCATCCAGATCGTCATCAAGGTTCTTCCAAGGCTATGGCAGAAGAGAAGTTCAAGCATTGCAGTGCAGCTTATCAATCTTTATGTGATAAGCTGGCGTTGGATTAA 765 0.4248 MSSAIFKAANSNNLHSSLRAALFHSTPPLQRKRRNYWDSRGNNHYSRRFRRMQAKHRVMQSVNDYAEFLFQSWKEDTDKEDPSSSRGTSWFKKQYSGGGSKRYRNGNQGSSHQYKRDPLFCEDDFDVETIFRSAFGGNRFFYWSFINDENPQWRRSERFSNFEKSWNWRYRNENDYDSSSETDSSDSDLVPDRLALGLNASGPLKLEDVKNAYRVCALKWHPDRHQGSSKAMAEEKFKHCSAAYQSLCDKLALD 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02031 254 Pfam DnaJ domain 204 250 IPR001623 -
Cca03g02031 254 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 11 253 - -
Cca03g02031 254 MobiDBLite consensus disorder prediction 87 112 - -
Cca03g02031 254 Gene3D DnaJ domain 194 249 IPR036869 -
Cca03g02031 254 MobiDBLite consensus disorder prediction 77 112 - -
Cca03g02031 254 PRINTS DnaJ domain signature 213 228 IPR001623 -
Cca03g02031 254 PRINTS DnaJ domain signature 232 252 IPR001623 -
Cca03g02031 254 SMART dnaj_3 190 252 IPR001623 -
Cca03g02031 254 CDD DnaJ 206 249 IPR001623 -
Cca03g02031 254 SUPERFAMILY Chaperone J-domain 151 249 IPR036869 -
Cca03g02031 254 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 11 253 - -
Cca03g02031 254 ProSiteProfiles dnaJ domain profile. 191 252 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02031 Cca-Chr3 40475451 40480300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02031 - - gmx:100807880 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02031 03 40475451 40480300 Cca03g02031 03 40475451 40480300 ECH
Cca03g02031 03 40475451 40480300 Cca02g00737 02 18079195 18082825 PCT