Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00737 ATGTTTCAGAGCTGGAAAGGAGACATTGACGAGGATGATCCGTCTCCCAGTCAAGACCCCTCATGGTTTAGAAAACAATATTCTCCTAAGGGCCCTGCAAGGCATGGGAGTGGCAATCAAAGATCAAAGCACCGGTTAAAAAGAGACCATGAGTTTTGCAAAGATGATTTTGATATTGAAACTGTTTTTCGCTCCGCCTTTGGTGGCAACCGATCTTTCTATTGGTCCTTTATAAATGAGGAAAATCCTCAATGGAAGAGGTCCGGAGGCTTTTCTAGTCAGGGAAAATCTTGGAACCAGAGACGTCAGAGTGAAAACAAATATGGCTCATCAACCAAGtccgagtcagattgttcatattcagattcaatttcagaAAGATTAGCCCTTGGATTGAGTGCTTATGGCCCTCTGAAACTTGAGGAAGTGAAAAATGCGTACCGGATATGTGCCTTAAAGTGGCATCCAGATCGTCATCAAGGCTCTTCTAAGGTTATAGCAGAGGAAAAGTTCAAGCATTGCAGTTCTGCTTATCAATCTTTGTGTGATAAGCTGGCCTTGGATTAG 567 0.4056 MFQSWKGDIDEDDPSPSQDPSWFRKQYSPKGPARHGSGNQRSKHRLKRDHEFCKDDFDIETVFRSAFGGNRSFYWSFINEENPQWKRSGGFSSQGKSWNQRRQSENKYGSSTKSESDCSYSDSISERLALGLSAYGPLKLEEVKNAYRICALKWHPDRHQGSSKVIAEEKFKHCSSAYQSLCDKLALD 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00737 188 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 187 - -
Cca02g00737 188 MobiDBLite consensus disorder prediction 1 46 - -
Cca02g00737 188 MobiDBLite consensus disorder prediction 86 114 - -
Cca02g00737 188 CDD DnaJ 140 183 IPR001623 -
Cca02g00737 188 Gene3D DnaJ domain 128 183 IPR036869 -
Cca02g00737 188 ProSiteProfiles dnaJ domain profile. 125 186 IPR001623 -
Cca02g00737 188 SUPERFAMILY Chaperone J-domain 88 183 IPR036869 -
Cca02g00737 188 Pfam DnaJ domain 139 184 IPR001623 -
Cca02g00737 188 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 187 - -
Cca02g00737 188 SMART dnaj_3 132 186 IPR001623 -
Cca02g00737 188 PRINTS DnaJ domain signature 166 186 IPR001623 -
Cca02g00737 188 PRINTS DnaJ domain signature 147 162 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00737 Cca-Chr2 18079195 18082825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00737 109 185 Miscellaneous Gene Families AT5G49580 32.143 1.06e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00737 - - gmx:100812123 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00737 02 18079195 18082825 Cca02g00737 02 18079195 18082825 ECH
Cca03g02031 03 40475451 40480300 Cca02g00737 02 18079195 18082825 PCT