Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01913 ATGGCTAGAAAATTAAGCATCATTATACTCTGCCTTGTTCAAATGCTGCTTCTTCTCGTTGAAAACCATGCTGAGATTGTTGTGTCCACCGTTGAGGCTCCAGCTCCGCAGCCTAGCAAAAACGCCACTCATTTTCCCAGTCGTGGCATCACCGAAGGCAGTCTTCAACCACAAGAATGCGGGCCACGTTGCACAACTAGATGCTCAAAGACACAGTACAAGAAACCATGCTTGTTCTTCTGCAAAAAGTGTTGTGCCAAGTGCTTATGTGTGCCTCCCGGTACTTATGGTAACAAGCAAGTTTGCCCTTGCTACAACAATTGGAAGACCAAAAGGGGAGGACCCAAGTGCCCCTGA 357 0.4762 MARKLSIIILCLVQMLLLLVENHAEIVVSTVEAPAPQPSKNATHFPSRGITEGSLQPQECGPRCTTRCSKTQYKKPCLFFCKKCCAKCLCVPPGTYGNKQVCPCYNNWKTKRGGPKCP 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01913 118 Pfam Gibberellin regulated protein 59 118 IPR003854 -
Cca03g01913 118 PANTHER GIBBERELLIN-REGULATED PROTEIN 13 1 118 - -
Cca03g01913 118 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01913 Cca-Chr3 38730756 38734554 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01913 - - gmx:100818749 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01913 03 38730756 38734554 Cca03g01913 03 38730756 38734554 ECH
Cca03g01913 03 38730756 38734554 Cca02g00384 02 8065836 8067603 PCT