Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00384 ATGGCCACAAACTTGAGCATCTCTATCTTCTGCCTAGTTTCAATGCTTCTTCTTCTTGTGGAGAGCCATACTGAGATTGATGCTGCTACCATTGAGACCCCAGCTCCCGCTCCCGCTCCTGCACCAGTTAAACAGCCAAGCAAAAAGGATGGCACTACTGAAGGTAGTCTTCAACCACAAGATTGCAGTCCTCGTTGTGCGGACAGATGCTCGAAGACACAATACAAGAAGCCGTGTTTGTTCTTCTGCCAAAAGTGCTGTGCCAAATGCTTGTGTGTGCCACCTGGAACTTATGGCAACAAGGAGGTCTGCCCTTGCTACAACAACTGGAAGACCAAAAGGGGAGGCCCCAAATGCCCCTAA 363 0.4959 MATNLSISIFCLVSMLLLLVESHTEIDAATIETPAPAPAPAPVKQPSKKDGTTEGSLQPQDCSPRCADRCSKTQYKKPCLFFCQKCCAKCLCVPPGTYGNKEVCPCYNNWKTKRGGPKCP 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00384 120 MobiDBLite consensus disorder prediction 31 65 - -
Cca02g00384 120 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 120 - -
Cca02g00384 120 Pfam Gibberellin regulated protein 61 120 IPR003854 -
Cca02g00384 120 PANTHER GIBBERELLIN-REGULATED PROTEIN 13 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00384 Cca-Chr2 8065836 8067603 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00384 - - gmx:100818749 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00384 02 8065836 8067603 Cca02g00384 02 8065836 8067603 ECH
Cca03g01913 03 38730756 38734554 Cca02g00384 02 8065836 8067603 PCT