Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca03g01637 | ATGGTGAAAGGAAGTGAAAGCGGTGCAGTTCCTGAAGGGGTTATGGATGCAGTCAACAGCACCCTCTCCAACCTCCAACAACTCCGAACGCACTTTCAACACTTTCTGTCTCTCTCCGACCCTCAACTTCTCTCCCAAATGCCACCTCTTCAGCGCGCTCACTCTCTCTTCATCTTCTCCAAAATCACTTCTACCCTCCTCGCACTGAACGTGAGGTGCAGTGGTGTCCACCCAGATGACCACCCCGTCAAATCAGAGCTCGATAGGTTGGACGTGTACGAGGACAAACTGGAACGGTTGCTTGATTTGAGTAGAGCTCCACTACGACCTTCTACTACCTTGAATTATCAGGCTGCTACTCGCTTCATAGAGCACTCTCTGCCTGACCTAACTCCAGAGCAAAGGGAAAATATGAGGAACATTAGTAGAGGGGAGAGACCAAAGATGAACCATCTAGGTCGTGCAGGTCAAAAGAGGAAGTATCAATCTTCTGAGAAACAACAATCTGTTCAAACGGCTGCCAAGGAGTTTCTGGAGAAAGCAGCCCGGGAGCTTCTTGGTGACAACAGTGGCGGTATTAAGGGACCATTACAAGTTGACATTTCGGAGGATGATGATGATGAATTGCCTGTGTCCTGA | 639 | 0.4898 | MVKGSESGAVPEGVMDAVNSTLSNLQQLRTHFQHFLSLSDPQLLSQMPPLQRAHSLFIFSKITSTLLALNVRCSGVHPDDHPVKSELDRLDVYEDKLERLLDLSRAPLRPSTTLNYQAATRFIEHSLPDLTPEQRENMRNISRGERPKMNHLGRAGQKRKYQSSEKQQSVQTAAKEFLEKAARELLGDNSGGIKGPLQVDISEDDDDELPVS | 212 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca03g01637 | 212 | MobiDBLite | consensus disorder prediction | 130 | 152 | - | - | |
| Cca03g01637 | 212 | Coils | Coil | 83 | 103 | - | - | |
| Cca03g01637 | 212 | PANTHER | NUCLEAR NUCLEIC ACID-BINDING PROTEIN C1D | 8 | 203 | - | - | |
| Cca03g01637 | 212 | PANTHER | SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR | 8 | 203 | IPR011082 | - | |
| Cca03g01637 | 212 | MobiDBLite | consensus disorder prediction | 130 | 212 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca03g01637 | Cca-Chr3 | 35407020 | 35408567 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca03g01637 | K12592 | - | gmx:100795174 | 365.155 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca03g01637 | 03 | 35407020 | 35408567 | Cca03g01637 | 03 | 35407020 | 35408567 | ECH | |
| Cca05g00768 | 05 | 21339589 | 21344652 | Cca03g01637 | 03 | 35407020 | 35408567 | PCT |