Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01579 ATGGCGAACATGATTATGGCTTCCTCCAAACCCTTGGTACCAGTCTGCACTAACTCCCGGTCCCCCACACCCAGAGTTCCCATTCTCCAAATTTCACTCCCCAAAGTCCCAACCTTGAAGCTGAAACTCCCAATTTCAAAGCCCCAATTGTTGTCCCTCATGGGGATGGCACCACTGGTCTTGGCCCAGCCCTCGCTTGCAGCAGAAATAGAGAAAGCAGCTCTCTTCGATTTCAACCTGACCTTGCCCATAATAATGGCGGAGTTTCTGCTGCTGATGGTTGCCTTGGACAAGGTTTGGTTCACCCCACTTGGGAAATTCATGGACGAAAGGGACGCGGCGATCAGGGAGAAGCTGAGCAGCGTGAAGGACACCTCTGAGGAGGTGAAGCAGTTGGAGGAGAAGGCCAATGCAGTGATGGCGGCTGCTCGGGCGGAGATAGCGGCGGCTCTGAACACGATGAAGAAGGAGACGCAGGCTGAGGTGGAGCAGAAGATTGCCGAGGGTAGGAAGAAAGTGGAGGCTGAGCTGCAGGAGGCTCTCGCTAGCTTGGAGAAGCAAAAGGAAGAAACCATCAAGTCCCTTGATTCCCAGATTGCTGCTCTAAGTCAGGAGATTGTTAATAAGCTCAATGTGGCCGAAGGGATCATGAGAGCTGTAGACTGCAGTCAATAA 675 0.5274 MANMIMASSKPLVPVCTNSRSPTPRVPILQISLPKVPTLKLKLPISKPQLLSLMGMAPLVLAQPSLAAEIEKAALFDFNLTLPIIMAEFLLLMVALDKVWFTPLGKFMDERDAAIREKLSSVKDTSEEVKQLEEKANAVMAAARAEIAAALNTMKKETQAEVEQKIAEGRKKVEAELQEALASLEKQKEETIKSLDSQIAALSQEIVNKLNVAEGIMRAVDCSQ 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01579 224 Coils Coil 170 205 - -
Cca03g01579 224 Coils Coil 115 168 - -
Cca03g01579 224 Hamap ATP synthase subunit b' [atpF2]. 75 212 IPR034679 GO:0015078|GO:0015986|GO:0045263
Cca03g01579 224 CDD ATP-synt_Fo_b 81 210 - -
Cca03g01579 224 PANTHER ATP SYNTHASE SUBUNIT B', CHLOROPLASTIC 1 210 - -
Cca03g01579 224 Hamap ATP synthase subunit b [atpF]. 76 213 IPR002146 GO:0015078|GO:0015986|GO:0045263
Cca03g01579 224 PANTHER ATP SYNTHASE SUBUNIT B', CHLOROPLASTIC 1 210 - -
Cca03g01579 224 Pfam ATP synthase B/B' CF(0) 82 210 IPR002146 GO:0015078|GO:0015986|GO:0045263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01579 K02109 - gmx:100527009 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01579 03 34542636 34543730 Cca03g01579 03 34542636 34543730 ECH
Cca05g00516 05 11703721 11707436 Cca03g01579 03 34542636 34543730 PCT