Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01224 ATGGATTCTGGAAACAGTGGAAGCATCTCCTCCAGCGATGAAGAATACGATTCATCACAGGCTGATCCATCGTTCCTCAACCATTTCGGCTCCATCTCCCACCCCCAACCATTACCAACCCTCGTTCCTTCCCACCCCTCAATGTTTGATCTTTCCTCAACCTACCTCCATCATCATTCCTTGCTAAACTTGGACTCTCAAGGCCCAAGATCTGAAGTACCCAATTGCACCAACCCTCAAGCCCTACTACCATCCGCAACACCAACACACGACAACATTAATGCTATACACCAACTTTCATCACCGCCAAACAACAACAACCTCGTACGCAACACAAAGAAACGAAGCAGGGCTTCAAGGAGAGCACCCACCACCGTTCTCACCACCGACACCACCAATTTCAGATCCATGGTTCAAGAGTTCACCGGAATCCCTGCGCCTCCCTTCTCACCCTCCTTCTCTCGCCGCCTACCTCTTCGCCCAAACCCTTTCCTTTCAACTCCCTCAAGAACCTTGTTACacaacaacaataacaacaccatcaacGTTTCTCTTTCTCCTAATAATAATAATTCTTCCATTAACTACCAACTACTTCCTGATCTATCTTTACCCTATCATCAGCCCCCACAGAATAATTTCATGCAGAATCACCCTATCGGTATTCCAGCGTTTCACCCCTCTCCTCCTCTTCACTCTCTTGTCCCTGCAGGGTTTGGTGATTTGAACCAAAGCCAAGTGAGTGCGCACGTGGTGGGTGCTAACGAACACGTGGGTTCTGAGGGCATGCTTCTGAGGAGTGGCGGTGATGACGGAGGAGGGAGAAGAGACCCGTATAATTATGGTAGCTGTAAGCTAAACATCTCGGTTTCTGCGTTGAGCAGCTTGAACAATGAGAAGAACAACGTTAACTTGGAGAATGGTAATTCCCCTAGGGAAGGTGCCGTGGAGGCGTGGATTTGTTCTTCTCATCAATAG 978 0.4744 MDSGNSGSISSSDEEYDSSQADPSFLNHFGSISHPQPLPTLVPSHPSMFDLSSTYLHHHSLLNLDSQGPRSEVPNCTNPQALLPSATPTHDNINAIHQLSSPPNNNNLVRNTKKRSRASRRAPTTVLTTDTTNFRSMVQEFTGIPAPPFSPSFSRRLPLRPNPFLSTPSRTLLHNNNNNTINVSLSPNNNNSSINYQLLPDLSLPYHQPPQNNFMQNHPIGIPAFHPSPPLHSLVPAGFGDLNQSQVSAHVVGANEHVGSEGMLLRSGGDDGGGRRDPYNYGSCKLNISVSALSSLNNEKNNVNLENGNSPREGAVEAWICSSHQ 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01224 325 Pfam VQ motif 121 148 IPR008889 -
Cca03g01224 325 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 322 IPR039609 -
Cca03g01224 325 MobiDBLite consensus disorder prediction 97 125 - -
Cca03g01224 325 MobiDBLite consensus disorder prediction 97 112 - -
Cca03g01224 325 MobiDBLite consensus disorder prediction 1 31 - -
Cca03g01224 325 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01224 Cca-Chr3 29120627 29122220 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01224 - - gsj:114410527 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01052 05 27259761 27261292 Cca03g01224 03 29120627 29122220 PCT