Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01184 ATGAAGACTCGCACCTCTGCGAAAATCTCCGCAACATGGATTCCCATTTTCTCTGTGTTTTCCTTCATTCTGGGCATGCTCATCACAAGCAGGATGTGGGACCCACCTGAATCAAACGGGTTGCTTATTTCGCAGCATCAACGGGACCAACAACTTCAAGTGATCTCAGGGGACTGCGCTACCAAGAAGATGCAGCCAAAGGATGCAGTGAGCGAATTAGAGAAGACCCATGAGGCCATTCAGCGTGTCAGAGCTCTAGACAAGCAAGTTTCCGTGCTTCAGATGGAGTTAGCAGCAGCTAGGAATTCTCGTGAAAATGGGATCTTGGATTCAAATGCTTCATCCACCACCTCGGGGTCCTCCATGGAAGGTACTCCTAGGAAGAAGGCTTTTATAGTGATTGGCATAAACACAGCTTTCAGTAGCAGGAAGCGGCGTGATTCAGTTAGAGAGACTTGGATGCCTCAAGGTGAACAACTTCTTCAACTGGAACGAGAGAAGGGAATTGTTATCAGATTCATGATTGGCCACAGTGCAACTTCCAACAGCATTCTAGACAGAGCTATTGATTCAGAAGAGGCCCAGCACAAAGACTTCCTTCGCCTAGAACACGTTGAAGGGTACCATGAGCTATCTGCAAAGACAAAAATTTTCTTTTCTACTGCAGTTGCAAAATGGGATGCTGATTTCTATGTCAAGGTGGATGATGATGTCCACGTCAATTTAGGTGTCCTGGCAACAACCCTTGCTCGTCATAGATCAAAACCCCGGGTCTACATTGGGTGTATGAAATCTGGACCTGTCCTTTCAAGAAAGGATGTCAAATACCATGAACCTGAGTTTTGGAAGTTTGGCGAAGAGGGTAACAAATACTTTCGACATGCAACTGGGCAGATATATGCAATCTCTAAGGATCTGGCTACTTACATTTCCATCAACCAGCCGATTTTGCATAAATATGCTAATGAAGATGTCTCACTTGGTGCATGGTTCATTGGTCTTGAAGTTGAGCATATTGATGACCGCAATATGTGCTGTGGAACTCCTCCAGATTGTGAGTGGAAGGCGCAGGCAGGTAACATATGTGTTGCATCGTTTGATTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATATGTGCACTCAAAGTGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCTTTATTTTAG 1200 0.4542 MKTRTSAKISATWIPIFSVFSFILGMLITSRMWDPPESNGLLISQHQRDQQLQVISGDCATKKMQPKDAVSELEKTHEAIQRVRALDKQVSVLQMELAAARNSRENGILDSNASSTTSGSSMEGTPRKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGVLATTLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRNMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01184 399 Pfam Galactosyltransferase 144 341 IPR002659 GO:0006486|GO:0016020|GO:0016758
Cca03g01184 399 Coils Coil 83 103 - -
Cca03g01184 399 Gene3D - 122 345 - -
Cca03g01184 399 PANTHER HEXOSYLTRANSFERASE 8 391 - -
Cca03g01184 399 Pfam Domain of unknown function (DUF4094) 10 102 IPR025298 -
Cca03g01184 399 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 391 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01184 Cca-Chr3 28337748 28342295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01184 1 399 Glycosyltransferase AT1G77810 71.960 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01184 K20855 - gmx:100776715 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01184 03 28337748 28342295 Cca03g01184 03 28337748 28342295 ECH
Cca05g01012 05 26435255 26439556 Cca03g01184 03 28337748 28342295 PCT