Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00687 ATGCGGCGGCGCCCCGCCGAGTTTCGCCGCCCGGTGCGGCGCCGGTGGTTCTCTCATTGGATCTGCTTGCTTCTCGCCGCTTTCTCTCTCGCGGCTTTGGTTCTCTTCCTCGTGCAACACAATCACCGTGAAGATCGCCTCCAACACCCTCTTATGGAGAGAAATGCTAAAGTTGAACATTTTCCTAAGAAATTGAATTTTACTGAAGAAGTTTTAAGTGCAACATCCTTTTCACGGCAATTATCAGAGCAAATGATTCTGGCCAAGGCTTATGTGATTATTGCCAAAGAGCACAATAATCTTCACCTAGCCTGGGAGCTTAGTTCAAAGATTAGAAGTTGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGTGAGCCTGTGACCATGGAGGAGGCTGAGCCAATCATTAAAAGCATGTCTTCTCTAATTTTCAAGGCACAAGATGTCCATTATGACATTGCAACCACTATAGCAACAATGAAATCACATATTCAAGCACTTGAAGAGCGTGCGAATGCAGCAACAATTCAAAGCACTGTGTTTGCTCAAATATCAGCTGAAGCATTACCCAAAAGTCTTCATTGCTTAAATGTGAAACTTATGGCTGATTGGCTAAAGATGCCATCACTGCAAGAACTCTCACGTGTGAGGAGAAACTCCCCCCGGCTCACAGATAACAATCTATATCATTTCTGCATTTTTTCAGATAATGTCATGGCTACATCTGTAGTTGTTAACTCTACAGTCATCAATGCTGACCATCCAAAACAGTTAGTCTTTCACATTGTTACTAATGGTATCAATTATGGAGCAATGCAAGCATGGTTCCTCAGTAATGACTTTAAAGGGGTTACCATAGAGGTGCAGAGTATTGAGGATTTTCATTGGTTGAATGAATCTTATTCTCCAATTGTCAAACAGCTACACAGTCCAGAATCACGGCCCCTTTATTTTGGACCTTATCAAGGTGTAAATTTTGAGCCAAAGTTGCAGAACCCCAAGTCTTTGTCTTTACTAAATCATCTTCGGTTTTACATCCCTGAGATTTATCCACTGCTTGAGAAGgttgttttcgttgatgatgatgttgttgtCCAGAAGGACCTAACCCCACTTTTCTCACTGGATTTGCATGGAAATGTGAATGGTGCTGTTGAAACTTGTCTAGAAGCATTTCATAGGTACTACAAGTATCTCAACTTCTCAAATTCAATTATAAGCTCAAAGTTTGATCCACAGGCATGTGGATGGGCACTTGGTATGAATGTTTTTGACTTGGTTGCATGGAGGAAAGCAAATGTGACTGCAAGGTATCATTATTGGCAGGAGCAGAATGCTGATGGGACACTCTGGAAGCTTGGTACACTTCCCCCTGCCCTTCTAAGTTTTTATGGTTTGACAGAACCACTAGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAATATTGACAACCGCCTGATTGAAAGTGCAGCAGTTATTCACTTTAATGGGAACATGAAACCGTGGCTCAAGTTAGCTATAGGCAGGTATAAGCCATTATGGAACAAGTTCATAAATCAAAGTCACCCTCATCTTCAAGATTGTGCCACAGGTTAA 1608 0.4148 MRRRPAEFRRPVRRRWFSHWICLLLAAFSLAALVLFLVQHNHREDRLQHPLMERNAKVEHFPKKLNFTEEVLSATSFSRQLSEQMILAKAYVIIAKEHNNLHLAWELSSKIRSCQLLLSKAAMTGEPVTMEEAEPIIKSMSSLIFKAQDVHYDIATTIATMKSHIQALEERANAATIQSTVFAQISAEALPKSLHCLNVKLMADWLKMPSLQELSRVRRNSPRLTDNNLYHFCIFSDNVMATSVVVNSTVINADHPKQLVFHIVTNGINYGAMQAWFLSNDFKGVTIEVQSIEDFHWLNESYSPIVKQLHSPESRPLYFGPYQGVNFEPKLQNPKSLSLLNHLRFYIPEIYPLLEKVVFVDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACGWALGMNVFDLVAWRKANVTARYHYWQEQNADGTLWKLGTLPPALLSFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWNKFINQSHPHLQDCATG 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00687 535 Pfam Glycosyl transferase family 8 234 509 IPR002495 GO:0016757
Cca03g00687 535 CDD GT8_like_1 230 523 - -
Cca03g00687 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 532 IPR029044 -
Cca03g00687 535 PANTHER HEXOSYLTRANSFERASE 3 534 - -
Cca03g00687 535 Coils Coil 158 178 - -
Cca03g00687 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 534 IPR029993 GO:0047262
Cca03g00687 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 532 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00687 Cca-Chr3 12621757 12625857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00687 1 532 Glycosyltransferase AT2G20810 54.935 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00687 K13648 - gmx:100817381 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00687 03 12621757 12625857 Cca03g00687 03 12621757 12625857 ECH
Cca11g02046 11 46022020 46024816 Cca03g00687 03 12621757 12625857 PCT