Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00503 ATGGGAAATTGCCAAGCCATAGATGCAGCAACACTAGTGATTCAACATCCAAATGGTAAAGTAGACAAATTCTATGCACCCTTGAGTGTCACCCATGTCATGAAAACCAACCCTGGTCACTACGTTGCTCTTCTCATCTCCACCACATTGTGTCCAACCAAGACTCACACCAACACCAACCCTGTTCGCATAACTCGCATCAAGCTTCTCAAGCCCTCTGACACCCTTGTCCTTGGCCAAGTTTATAGACTCATCACAACTCAAGAGGTCATGAGGGGTCTCAGGGAAAAGCAAAAGGCAAAGGTGAAGTCAGAATCAGCTCACAAGCCAGATTTGGTGAATGAGAAAGTGGGTTTGGAGAAGGAGAAAGTAGCAAAGAGGCCTGACATAGAGGACAGCAAGGTAATTACGAAAACTGAAAGAGCAAGACCAAGGGTAACAACAGGAACTAATAATGGTGGCGGTGGCACAGCTAAGACAAGATTTTGGCAACCCTCTTTGCAAAGTATCTCAGAGGCTGCCAGCTGA 528 0.4621 MGNCQAIDAATLVIQHPNGKVDKFYAPLSVTHVMKTNPGHYVALLISTTLCPTKTHTNTNPVRITRIKLLKPSDTLVLGQVYRLITTQEVMRGLREKQKAKVKSESAHKPDLVNEKVGLEKEKVAKRPDIEDSKVITKTERARPRVTTGTNNGGGGTAKTRFWQPSLQSISEAAS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00503 175 Pfam PADRE domain 1 172 IPR025322 -
Cca03g00503 175 MobiDBLite consensus disorder prediction 143 175 - -
Cca03g00503 175 PANTHER DUF4228 DOMAIN PROTEIN 1 175 - -
Cca03g00503 175 MobiDBLite consensus disorder prediction 130 175 - -
Cca03g00503 175 PANTHER EXPRESSED PROTEIN 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00503 Cca-Chr3 8300875 8302837 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00503 - - ccaj:109810780 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00503 03 8300875 8302837 Cca03g00503 03 8300875 8302837 ECH
Cca11g01872 11 43899093 43900874 Cca03g00503 03 8300875 8302837 PCT