Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca03g00473 | ATGCAGCATGAGCGAGCGGAAGGTTCTTCTCACCACAACGAGGCATCTCCATCTCCCAGCTTCAGCAGCTACTCCTCGGAGACGCTGGCGGAGATCGCCGCCAGGGTGATCGAGGAGCTCCGCCGCGACCCCCATTCGGCCGCCGACGACGAAGCGCTCTTCCCGCCATGGGAAAACGAGGAGCCGCCACAAGAAAACGAGGACTTCGAGTTCGCCTTCGTTTCCAGAGACCTGGCCTCGCCCGTATCCGCCGACGACATTTTCCTCAACGGCCAGATCAGGCCCATGTACCCAATCTTCGGCTTCCCCTCAAACGCCGCCGTTTCGGGAGTGCCCAGCGCCAGCCACAGCCCCGAGAGACAACGTCGTCTGCCTCTCAGAAAACTAATGTTCGAGGAGGGCGAAACGGCCTCCTGCTCCTCGTCAACGGACGACAGCCTTGACCTGGAGGGGGAAGCCGCCTACTGCGTCTGGACCCCCAATTCCGTTGGGAGGGAACGGAAAAAGAGCAACTCCACGGGGTCCGCTTCCAAACGCTGGAAGCTTCGAGATTTGCTTCTCAGGAGCCACAGTCAGGGcaagaacaaacaacaacaacaacaacatcaTGTGCCGTTTCAgaacggaacggaacacggacgagaacagaacAAGAGAAACTCCTTCTTGCCTTACAGGCCCGAGTTAGTTGGACTTTTCGCTAATGTCAATGGCCTTGGTCGGAATTTGCGTCCCTTTTGA | 741 | 0.5425 | MQHERAEGSSHHNEASPSPSFSSYSSETLAEIAARVIEELRRDPHSAADDEALFPPWENEEPPQENEDFEFAFVSRDLASPVSADDIFLNGQIRPMYPIFGFPSNAAVSGVPSASHSPERQRRLPLRKLMFEEGETASCSSSTDDSLDLEGEAAYCVWTPNSVGRERKKSNSTGSASKRWKLRDLLLRSHSQGKNKQQQQQHHVPFQNGTEHGREQNKRNSFLPYRPELVGLFANVNGLGRNLRPF | 246 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca03g00473 | 246 | MobiDBLite | consensus disorder prediction | 191 | 207 | - | - | |
| Cca03g00473 | 246 | Pfam | Protein of unknown function (DUF1645) | 84 | 218 | IPR012442 | - | |
| Cca03g00473 | 246 | MobiDBLite | consensus disorder prediction | 40 | 68 | - | - | |
| Cca03g00473 | 246 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Cca03g00473 | 246 | PANTHER | - | 15 | 240 | - | - | |
| Cca03g00473 | 246 | PANTHER | DUF1645 FAMILY PROTEIN | 15 | 240 | - | - | |
| Cca03g00473 | 246 | MobiDBLite | consensus disorder prediction | 190 | 217 | - | - | |
| Cca03g00473 | 246 | MobiDBLite | consensus disorder prediction | 12 | 26 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca03g00473 | Cca-Chr3 | 7570217 | 7571572 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca03g00473 | - | - | ccaj:109791186 | 464.922 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca11g01843 | 11 | 43479670 | 43480386 | Cca03g00473 | 03 | 7570217 | 7571572 | PCT |