Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00466 ATGTTGAGAATCGCCGCAAGCGCAAAGAGGCTCCTGACGACGTCGTTGGAGGCGCCACTGCTGGGGATTAGGGTTCTGCCGCGGCTCTACCACGAGCGGGTGGTTGACCACTACGACAACCCCCGCAACGTCGGATCCTTCGACAAGAACGATCCCGCCGTCGGAACTGGCCTCGTCGGGGCACCCGCGTGCGGCGACGTCATGAAACTCCAAATTAAGGTTGACGACAAAACCGGGAAGATCGTCGATGCTCGCTTCAAAACCTTCGGATGTGGATCCGCCATTGCTTCTTCCTCCGTCGCTACTGAATGGGTTAAGGGAAAGCAAATGGAGGAGGTTTTGACCATTAAAAACACGGACAAATATGTTCTTGAATTTCATTTGACAAGGCCTTCCAAATTCAGGGACTAA 411 0.5377 MLRIAASAKRLLTTSLEAPLLGIRVLPRLYHERVVDHYDNPRNVGSFDKNDPAVGTGLVGAPACGDVMKLQIKVDDKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTDKYVLEFHLTRPSKFRD 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00466 136 Gene3D - 29 134 - -
Cca03g00466 136 CDD IscU_like 29 120 IPR002871 GO:0005506|GO:0016226|GO:0051536
Cca03g00466 136 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 25 125 IPR002871 GO:0005506|GO:0016226|GO:0051536
Cca03g00466 136 Pfam NifU-like N terminal domain 30 120 IPR002871 GO:0005506|GO:0016226|GO:0051536
Cca03g00466 136 PANTHER IRON-SULFUR CLUSTER ASSEMBLY PROTEIN 25 125 - -
Cca03g00466 136 SUPERFAMILY SufE/NifU 29 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00466 Cca-Chr3 7343413 7344290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00466 K22068 - gmx:100806169 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01836 11 43392337 43394352 Cca03g00466 03 7343413 7344290 PCT