Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00410 ATGATGAAGGAGAGCGATCCGCCAAATGAACAGCCTGAATCTGTTGCCTTTAGGAAGAACCTGGAGAAGCTCAAGTTGGACTTGGGCAGCATTAATCAAGGGATTCGGACTTATATAATGGGACAGAGAATTGATGTACCTAGGGGGCCTCCAAGATATCTTATTGGGGATGAAGATGATGACAAAACAGAAGTGGGTGATCCTGTGTTTGATGGAGGAAAGTATTCAGTGTACAATGACACAGATGAGGATGATGATTCTCAATCTCTTATTCAATGTACCTTCTGTGATTTTATGATTGATTTTTCTGCGGTCTGTAACTGTTTGGAAGGCTATGACCCGGATAATATGCTTTGTCCGGTGTGTGACGAAAAATTAGGGGATGAAGCAATCAGGGTTATCTGGAATTCAATCTCACAAAAGAGAACTTGGAAGTCTGACACATCTAGCGTCTCCTCGGTTGATTCATTAGATCTTGATGAGAAACTTCCTGTCAGGGGAACCAAACATGAACCAGTGCCTGATCCACTTTTGTCACTTGGCAATGTGTCTGTTCCAAAATCTGGTGGTATCCATACTAGTGAAGGTTCCTCCTGCAAGGCCTCAGACATTACCAAAGCAGAAGGCGCTGTGACAGATTCATCCCCGGATTCTGGTGATGAGAAGGATGCTGAAGAGAGAAGGTTGACAGCAACTTTTGTTCAAGAGTTGGTATTATCAACTTTAATCTAG 732 0.4303 MMKESDPPNEQPESVAFRKNLEKLKLDLGSINQGIRTYIMGQRIDVPRGPPRYLIGDEDDDKTEVGDPVFDGGKYSVYNDTDEDDDSQSLIQCTFCDFMIDFSAVCNCLEGYDPDNMLCPVCDEKLGDEAIRVIWNSISQKRTWKSDTSSVSSVDSLDLDEKLPVRGTKHEPVPDPLLSLGNVSVPKSGGIHTSEGSSCKASDITKAEGAVTDSSPDSGDEKDAEERRLTATFVQELVLSTLI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00410 243 MobiDBLite consensus disorder prediction 188 227 - -
Cca03g00410 243 PANTHER PROTEIN DEHYDRATION-INDUCED 19 80 243 IPR033347 -
Cca03g00410 243 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 5 80 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00410 Cca-Chr3 6361570 6365114 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00410 - - aprc:113851017 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01790 11 42750489 42755489 Cca03g00410 03 6361570 6365114 PCT