Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00407 ATGCAAGACTCAATTGGGATTCCAGCTTGCTTCTCTTCTGCATTGAAATCAAGTGATGATCACACAACGGTGACCCGCTCAGGCCAGAGCCTTCACATGTCAGTGTACAGAACCAAGATTGCTGATCAGTGCCGCTTGATCACCATCACATGGTGCAAAAACTTGATGCTCCATGGGCTATCAGTGTCAGTGGAAGGCCCAGAAGGAGAGGCCCAATACAGCTGCAAGGTGGAGCTGAAGCCCTGGTACTTTTGGAGAAAACAAGGTTCCAAGCGCTTGACACTGCATGGTAACAACAAAGCCGTTGACATTTTCTGGGACCTTAAGGCTGCGAAATTCAAAGGCGAGACAGAACCAACCTCGGAGTACTATGTAGCAGTGGTGTGCGACCAAGAGGTTGTGTTGCTGATCGGTGATTTGAAGAAAGAAGCGTACAGAAGAACCGGGTGCAGACCAGCGCTTATCGACCCAATATTGGTTTGGAAAAAAGAACACATGTTTGGGAAGAGAAAGTTCTCCACTAGGGCCAAGTTCCACGAGAAGGGTAGGTGCCACGAGATCTCGATCGAGTGCAAGAACAAGAGCAACATCGGAGGAGATTCCGCAAGTGGGGTTCATGTTGAGGTTCAGCCAGAGATGGAGATAAGATTTGACGGGCACGTGGTGATCCACGTGAAGCACTTGCAGTGGAAGTTTAGAGGGAACGAGTCGATTCATCTCAACAAAATGAGAGTGGAGGTGTATTGGGACGTTCACGATTGGCTCTTTAGTCCTGGTTTGAAACATGCTTTGTTCATCTTTAAGCCTGTTTTATCATCTCTCTCTATGtcatcatcacactcactttcatcgtcttcaccacccttatcatcgtcgtcCACACCCTTGTCAACTCAAACCGGCAGTTCTGGCTCACTGGAGGGCTTTAGTGTCACCGAGTCATCCGAGTTTTGTTTGTTTCTATATGCTTGGAAGATTGATTGA 984 0.4543 MQDSIGIPACFSSALKSSDDHTTVTRSGQSLHMSVYRTKIADQCRLITITWCKNLMLHGLSVSVEGPEGEAQYSCKVELKPWYFWRKQGSKRLTLHGNNKAVDIFWDLKAAKFKGETEPTSEYYVAVVCDQEVVLLIGDLKKEAYRRTGCRPALIDPILVWKKEHMFGKRKFSTRAKFHEKGRCHEISIECKNKSNIGGDSASGVHVEVQPEMEIRFDGHVVIHVKHLQWKFRGNESIHLNKMRVEVYWDVHDWLFSPGLKHALFIFKPVLSSLSMSSSHSLSSSSPPLSSSSTPLSTQTGSSGSLEGFSVTESSEFCLFLYAWKID 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00407 327 PANTHER EXPRESSED PROTEIN 1 327 IPR008586 -
Cca03g00407 327 Pfam Plant protein of unknown function (DUF868) 27 325 IPR008586 -
Cca03g00407 327 PANTHER OS01G0909400 PROTEIN 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00407 Cca-Chr3 6333742 6335269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00407 7 325 EF-hand Containing Proteins AT5G28150 38.080 5.62e-69 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00407 - - gmx:100816323 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00407 03 6333742 6335269 Cca03g00407 03 6333742 6335269 ECH
Cca11g01788 11 42732730 42734583 Cca03g00407 03 6333742 6335269 PCT