Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00096 ATGGCTACGTCTTCTCCTCTCCCCTTACCCGAGCTCCACTTTCTCTCTCCACAAATCACCCCCAAACGCCGTATCTCACTCTCCAAACTTCCTTCCTCACCTTATTCCATTTCCCGCCACAACGCTTCTCTTCGCACTGCGCGAGTTCGCGCAATTAGAGAGGAACCTGCGTTGGCCGAGCGAGTCAACGACGTCGAATGGAGCGGAAACGGCGCTGCTGCGGAGTACGTTAACGGCGCCACTAACGGAAGCTTGGTGAAGTACGGTTACGAAAACGGAAGCGCAAATGGCGTTGCCGCGAAGGTGGTGGAAGTTGAAGCCTCCACGATGAGCGAGGATGGGAGGAAGAAAAGGTTGGAGGAGATTGGGAAAGAAGACGCGTGGTTTAAACAGACTGGGAATGGACAAGTTGAGGTAGCAGTTGCTCCTGGGGGTCGTTGGAACAGGTTCAAGACTTACTCCACACTACAAAGAACCTTTGAAATATGGGGTTTTTTTGCCACGTTTATCTTTAAGGCTTGGCTGAACAACCAGAAGTTCTCTTATAAAGGAGGAATGACTGAGGAAAAAATAACCTTAAGGCGAAAGGCCCTTGCCAAGTGGCTGAAGGAAAGCATTCTGAGATTAGGTCCTACATTCATCAAAATTGGCCAGCAGTTCTCCACTAGGGTGGACATTCTTCCTCAAGAATATGTTGACCAGTTGTCTGAACTTCAGGATCAAGTTCCTCCATTTCCCTCAGAGACCTCTGTAGCTATTGTTGAAGAAGAGCTTGGAGCTCCTTTACGTGACATCTTTGATCAGTTTGATTATGAACCAATAGCTGCTGCAAGTCTTGGTCAGGTTCATCGTGCTAGATTAAAGGGACAAGAGGTTGTTATTAAAGTGCAAAGGCCTGGTCTCAAGGATCTTTTTGATATTGATCTTAAAAACCTGAGGGTTATTGCTGAATATCTACAAAAATTTGATCCAAAATCAGATGGTGCAAAGAGGGATTGGGTTGCTATTTATGATGAATGTGCCTCTGTCTTATATCAGGAGATTGATTACACCAAGGAGGCCACCAATGCAGAATTGTTTGCAAGTAACTTTAAGAACATGGATTATGTGAAAGTTCCTATAATCTACTGGGATTATACCACACCACAGATTCTTACAATGGAGTATGTTCCAGGGATTAAAATAAACAAAATACAAGCTTTAGATGAACTGGGTGTTGACCGCAAAAGGTTAGGGAGATATGCTGTTGAGTCATACTTGGAACAAATTTTATCACATGGTTTCTTCCATGCTGACCCTCATCCTGGAAACATTGCAGTTGATGATGTCAATGGTGGAAGATTGATCTTCTATGATTTTGGAATGATGGGGAGTATCAGTCCAAACATTCGAGAAGGTTTGCTTGAAGCATTTTATGGAGTTTATGAGAAAAACCCAGACAAGGTCCTACAAGCAATGATTCAAATGGGAGTTCTTGTCCCCACTGGAGATATGACTGCAGTTAGAAGAACAGCACAATTCTTCCTTAACAGTTTTGAAGAGCGCCTGGCTGCTCAAAGGCGAGAGAGAGAGGAAGCAACAACTGAACTTGGATTTAAAAAACCATTAAGCAAGGAGGAAAAAATAAAGAAGAAGAAACAACGCCTGGCTGCTATTGGTGAAGATTTATTATCTATTGCTGGTGACCAGCCCTTCCGATTTCCTGCTACATTCACATTTGTTGTTAGAGCCTTCTCAGTGTTGGATGGCATTGGAAAGGGGCTCGACCCACGTTTTGACATTACCGAGATTGCCAAACCTTATGCCTTGGAGTTGCTAAGGTTTCGTGAAGCTGGGGTTGAAGTTGTCCTAAAGGACTTCAGGAAGAGATGGGATAGACAATCTCAAGCATTTTACAACTTATTCAGACAGGCTGATAGGGTTGATAAGCTTGCTGATATTATCCAAAGACTGGAGCAAGGTGATCTAAAGCTCCGAGTTCGAACATTGGAATCTGAAAGGGCATTCCAACGTGTTGCTGCAGTCCAGAAGACTATAGGGAATGCAGTAGCTGCTGGGAGCCTAATAAATCTTGCAACAGTTTTGTATCTCAATTCAATTCGTGTGCCTGCCATTGCTGCTTATATCTTTTGTGGACTGCATAGGCCACTACATGATTTAAGACCGAGAAATAGTACATGTTAA 2184 0.4386 MATSSPLPLPELHFLSPQITPKRRISLSKLPSSPYSISRHNASLRTARVRAIREEPALAERVNDVEWSGNGAAAEYVNGATNGSLVKYGYENGSANGVAAKVVEVEASTMSEDGRKKRLEEIGKEDAWFKQTGNGQVEVAVAPGGRWNRFKTYSTLQRTFEIWGFFATFIFKAWLNNQKFSYKGGMTEEKITLRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETSVAIVEEELGAPLRDIFDQFDYEPIAAASLGQVHRARLKGQEVVIKVQRPGLKDLFDIDLKNLRVIAEYLQKFDPKSDGAKRDWVAIYDECASVLYQEIDYTKEATNAELFASNFKNMDYVKVPIIYWDYTTPQILTMEYVPGIKINKIQALDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYEKNPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREREEATTELGFKKPLSKEEKIKKKKQRLAAIGEDLLSIAGDQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVVLKDFRKRWDRQSQAFYNLFRQADRVDKLADIIQRLEQGDLKLRVRTLESERAFQRVAAVQKTIGNAVAAGSLINLATVLYLNSIRVPAIAAYIFCGLHRPLHDLRPRNSTC 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00096 727 CDD ABC1_ADCK3-like 238 486 - -
Cca03g00096 727 Pfam ABC1 atypical kinase-like domain 237 485 IPR004147 -
Cca03g00096 727 SUPERFAMILY Protein kinase-like (PK-like) 239 481 IPR011009 -
Cca03g00096 727 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 3 708 - -
Cca03g00096 727 PANTHER ABC TRANSPORTER-LIKE PROTEIN 3 708 - -
Cca03g00096 727 Coils Coil 509 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00096 Cca-Chr3 1364544 1384849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00096 - - gmx:100791330 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00096 03 1364544 1384849 Cca05g00606 05 13886584 13896941 PCT