Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02515 ATGAAGCTTCTCTTTGGCAGCCTACTATTTTGCTCTCTTCTGCTAAGCTCCTCTTTCTTGGAAGAAGCCATGGCCTATGAAGATTCATCGTATTGCAGCAGCAAGTGTTCGGACAGATGCTCAGCGGCAGGTGTCAAGGATAGGTGCTTGAAGTACTGTGGAATATGCTGTGCAGAGTGCAAATGTGTTCCTTCTGGCACTTATGGGAACAAGCATGAATGCCCTTGCTACAGGGACAAGCTCAACAAGAAGGGCAAGCCCAAATGCCCTTGA 273 0.4799 MKLLFGSLLFCSLLLSSSFLEEAMAYEDSSYCSSKCSDRCSAAGVKDRCLKYCGICCAECKCVPSGTYGNKHECPCYRDKLNKKGKPKCP 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02515 90 Pfam Gibberellin regulated protein 32 90 IPR003854 -
Cca02g02515 90 PANTHER PEAMACLEIN-LIKE 1 90 - -
Cca02g02515 90 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02515 Cca-Chr2 46354344 46355255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02515 - - vra:106771497 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02515 02 46354344 46355255 Cca02g02515 02 46354344 46355255 ECH
Cca03g01837 03 37719538 37720228 Cca02g02515 02 46354344 46355255 ECH