Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02275 ATGGCTGTGCAAGCGTGGGAGACCTTGAAGGAGGAGATCGTCACCTACACTGGGCTATCTCCAGCCACCTTCTTCACCGTCCTCGCGCTCTTTCTCGCCGTTTACTACGTCGTTTCGGGTCTCTTTGGCTCTCCCGACGACCACCACCGCCGCCACCGCTCCGTCGAGGACGAGGAGGAGATGCCGCCTCTCCGCCCGCCGGTTCAGCTCGGCGAGATCACGGCCGAGGAACTCAAAGCCTACGACGGCTCCGATCTCGAGAAGCCCTTACTCATGGCCATCAAGGGCCAGATCTATGATGTCTCCCAGAGCAGGATGTTTTATGGACCTGGTGGACCATATGCCCTATTTGCAGGCAAGGATGCTAGCAGAGCTTTAGCGAAGATGTCTTTTGAAGAGAAAGATCTGACGGGGGATATTTCTGGACTTGGCCCATTTGAGCTTGACGCCTTACAAGACTGGGAATATAAGTTTATGAGCAAGTATGTAAAGGTTGGAACTGTTAAAAGTGAAGTTCCAGTAACTGAACCAGAGTCCACCAGTGAACCATCAGAATCTACTTCCCGTGATATTGATGCTGCTAAGCCTACTGAAGATGCCAAATCAGAACATGTAGCTGTTAAAAGTGATGAAACCCCTTCAAATGTTGAAGCAGATAAAGAGTAA 666 0.5105 MAVQAWETLKEEIVTYTGLSPATFFTVLALFLAVYYVVSGLFGSPDDHHRRHRSVEDEEEMPPLRPPVQLGEITAEELKAYDGSDLEKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELDALQDWEYKFMSKYVKVGTVKSEVPVTEPESTSEPSESTSRDIDAAKPTEDAKSEHVAVKSDETPSNVEADKE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02275 221 Gene3D - 71 169 IPR036400 -
Cca02g02275 221 MobiDBLite consensus disorder prediction 46 63 - -
Cca02g02275 221 MobiDBLite consensus disorder prediction 183 221 - -
Cca02g02275 221 MobiDBLite consensus disorder prediction 171 221 - -
Cca02g02275 221 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 64 169 IPR036400 -
Cca02g02275 221 SMART Cyt_b5_2 73 169 IPR001199 -
Cca02g02275 221 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 1 216 - -
Cca02g02275 221 PANTHER CYTOCHROME B5-LIKE HEME/STEROID-BINDING DOMAIN PROTEIN 1 216 - -
Cca02g02275 221 MobiDBLite consensus disorder prediction 46 66 - -
Cca02g02275 221 Pfam Cytochrome b5-like Heme/Steroid binding domain 74 168 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02275 Cca-Chr2 43267725 43269932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02275 K17278 - gmx:100788825 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02275 02 43267725 43269932 Cca02g02275 02 43267725 43269932 ECH
Cca08g00636 08 11530645 11536359 Cca02g02275 02 43267725 43269932 PCT