Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02252 ATGGCCTCTAACTTGAGCATGAGAATTTGGATGATCTTTGGCCTTGCATTTTTTCTCGCTCTGCAAGGCACTCTTGGAGGAATAGAGTGTGAGCAACTGAGCCATGACACGTGCTCATTCGCCGTGTCATCGGGTGGCAAACGATGTGTGCTGGAGAAGCGCGTCAAAAGGAGTGGCGAAGAGGCGTACACATGCAGAACATCAGAGATTGAAGCTGATAAACTCAAGGACCACATCGAAACTGACCAATGCATCAAGGCTTGCGGTTTGGACAGAAAATCCCTCGGAATCTCCTCAGACTCTCTCCTCGAATCTCGCTTCACGCAAAAACTCTGCTCCCCTCACTGCTACCAGTGCTGCCCAAACGTTGTTGACCTCTACTTCAATCTCGCAGCTGGCGAAGGAGTGTTTCTTCCCAACCTGTGTGAAGTGCAAGGTGTGAATGCTCGTAGAGGAATGGCTGAACTGAGAAGCTCTGGAATTGTGGCACCTGGACCTGTCAACTCTGTGCAGTTCACAGCTACTCCTCCAAGTCCAAGCATCCCTGTGGCGTTCACAATTGAGCCTCCCTCACTCCCACCAAACTAG 588 0.5085 MASNLSMRIWMIFGLAFFLALQGTLGGIECEQLSHDTCSFAVSSGGKRCVLEKRVKRSGEEAYTCRTSEIEADKLKDHIETDQCIKACGLDRKSLGISSDSLLESRFTQKLCSPHCYQCCPNVVDLYFNLAAGEGVFLPNLCEVQGVNARRGMAELRSSGIVAPGPVNSVQFTATPPSPSIPVAFTIEPPSLPPN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02252 195 PANTHER PAR1 PROTEIN 1 192 IPR009489 -
Cca02g02252 195 Pfam PAR1 protein 28 179 IPR009489 -
Cca02g02252 195 PANTHER PAR1 PROTEIN 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02252 Cca-Chr2 43096440 43097532 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02252 - - gmx:100787709 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02252 02 43096440 43097532 Cca02g02252 02 43096440 43097532 ECH
Cca08g00662 08 12228745 12230369 Cca02g02252 02 43096440 43097532 PCT