Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01818 ATGGGTTGTTTCATGGCATGTTTTGGTTTATCCAACAAAAGAAAGCGTAGAAAGACTCTCTACAAAGTCCTAGCTCCACACCAAAAATATGGAAACTATGAAGTTCTTGCTATAACAGAGAGATCAATTATCCAGGATTCCGAGCTCAGAGGCAGAGATGAAGTTAAGGAGAAAAATAGTGTTAAAAGCAAGAAGAAGAAGAAAGTTACCTTCAATTTGAATGTACAGGTATATGAGCTAAACCCTACTGCTTATCAGGTATTGAATAATGAGGAAGAAGAAAATAAGAACAATAGTGCAGAACTAGAAGGATCTGCAGCATTGCCAGTGAGATATCCTACCAATCATAgatattacaactgtggagatggatatgatgagggtgatgaaatagaatatgaggatgaatatgatgaggacgatgaatttgatgatgatgatgatgatgagtatgattgggatgatgatggtagcgaagagagtttagaaaaagatgaggctgaggtgtatgatgaaaaCACTAAACAGAAAGAGTTGTCAGAGTCATGCTATCCTTCTGTGGCAGATGATAAGATAAAGAATCAGATGCCACTTGATTCAAGTAATGCTGAGCTAAAATCCAATTTGAGTGGACGAGACAGAAGCATCATGCATTCTGTTCTGATCCCTGTGGAGAATCTCACACAGTGGAAAGCAATCAAAACAAAAGTTCCATCATCAAGCAAGCACAGGAGGAAGGAGAATGTTCCGTCATCAAAGCAACATACAAGCATGCCCTTGGTCACTGAAGCAAGCTTGAATTTCTCACCTTGCAGCTTGGAATCAAATGCCCTTCAGTCCAAGCCTCTATTGCCAGAAACTGCAGTTGATGCTAGTCTTTCAAACTGGTTGATTTCTCCTAATTATCCTCTCTCCTCAACCACAATTCATTGCCAATGA 939 0.3269 MGCFMACFGLSNKRKRRKTLYKVLAPHQKYGNYEVLAITERSIIQDSELRGRDEVKEKNSVKSKKKKKVTFNLNVQVYELNPTAYQVLNNEEEENKNNSAELEGSAALPVRYPTNHRYYNCGDGYDEGDEIEYEDEYDEDDEFDDDDDDEYDWDDDGSEESLEKDEAEVYDENTKQKELSESCYPSVADDKIKNQMPLDSSNAELKSNLSGRDRSIMHSVLIPVENLTQWKAIKTKVPSSSKHRRKENVPSSKQHTSMPLVTEASLNFSPCSLESNALQSKPLLPETAVDASLSNWLISPNYPLSSTTIHCQ 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01818 312 MobiDBLite consensus disorder prediction 236 260 - -
Cca02g01818 312 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 311 IPR039300 GO:0007142
Cca02g01818 312 PANTHER FK506-BINDING NUCLEAR-LIKE PROTEIN 1 311 - -
Cca02g01818 312 MobiDBLite consensus disorder prediction 135 167 - -
Cca02g01818 312 MobiDBLite consensus disorder prediction 135 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01818 Cca-Chr2 37633278 37634951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01818 - - gmx:100815399 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01818 02 37633278 37634951 Cca02g01818 02 37633278 37634951 ECH
Cca02g01818 02 37633278 37634951 Cca03g03071 03 52133653 52136271 ECH