Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01705 ATGTCCAAACCTCAAAATGATCCGCTTTTGCAATCGGAAACAACTTGTGGAACACTTCTCTACGAGCTTCAGATAATATGGGACGAAGTTGGGGAGACTGAGTCTGACAGAGACAGAATGCTGTTTGAGCTTGAACAAGAGTGTCTAGAAGTATACAGAAGGAAGGTTGATCTGGCAAATCGGTCTAGAGCTCAATTAAGGCAGGCAATAGCTGATTGTGAGGCAGAACTTGCAGCCATTTGTTCATCAATGGGAGAGCGACCAGTGCATATTAGACAGTCTGATCAAAATGCTGGAAGCCTGAAGGAAGAGCACGCAAGAATTATTCCGCAGTTGGAGGAGATGCAAAAAAGGAAATCTGAGCGTAATAGTCAATTTATAGAAGTTCAAGAGCAGATTCAAAGCATTTCAATTGAAATATATGGTACCAGAGAGTACGTTCCTGCTACTGTAGATGAAACTGATTTATCCTTGAGAAAACTTGAAGAATTGCACAGGCAGCTGCATGCACTTCAAATTGAGAAGAGTAGCCGCTTACAGAAAGTACAGGAGCAGCTGTATACATTGAATTCTCTTTGTTTAGTGCTTGGTTTGGATTTTAACCAAACAATTAGCAGAATTCATCCCAGCTTGGTGGACTCAGAAGGATCTAAGAGTGTAAGTAATGACACCATTCAGCAATTAGCTGTTGCTATACAAGAACTGCGGGAAGTTAAATTACAGAGAATGCAAAAGCTCCAAGACCTTGCAACAACAATGTTGGAGCTCTGGAACTTGATGGACACCCCTGTTGAAGAGCAGCAGATGTTTCAAAATGTTACTTGTAATATAGCTGCTTCAGAACATGAAGTAACTGAACCAAACACCTTGTCCGTGGACTTCATCAACTGTGTTGAGGCGGAAGTAGCTAGGTTAGAAGAGTTAAAATCAAGCAAGATGAAAGAGCTTGTATTAAAGAAGAGAACAGAGTTGGAGGAGATTTGTCGAAAGACTCATTTGGTTCCAGAAATAGATAATGCAGTGGAATATGCTGTTGATGCCATAGAATCTGGAGCTGTGGACCCTGCTTGTGTGCTTGAACAAATTGAACTTCAGGTTGCCCAGGTCAAAGAGGAAGCTTTTAGCAGAAAAGAGATACTTGAAAAAGTTGAGAAATGGTTAGCAGCGTGTGATGAGGAGTCTTGGCTTGAGGAGTACAACAGGGATGATAATCGATACAATGCTGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGGGCCTTGGTTAACAAAATTCCAGCCATGGTGGATGCTTTGTCTTCAAAAACTATTGCATGGGAAAAGGAAAAAGGCATTGAGTTCACATATGATGGTATTCGTCTGCTTTCAATGCTTGAAGAATACACTATATTAAGGCAAGAGAAAGAGCAAGAACGTCGTAGGCAGCGGGACCTGAAGAAACTCCAGGGACAAATGATAGCAGAACAGGAGGCACTATATGGGTCAAAACCAAGTCCTTCAAAGCCCCAGAGTGTAAAAAAGGGACCTAGGATGTCAACCGGAGGTGCATCTAGTAGAAGAGTGTCGCTTGGAGGAGCAATGCTTCAAACTCCAAAACCTGATTCAAAAGCTACACATGCACGTGCTATGAGAAAGATGGACAAAGCACACCAAATTGAGCATCTAAATTACCTGGATGATGGCGTTTCATGTTTGTCACCAGCTAGAAGAGGACTGGATATTGCTGGCGTTCCTGTAAAAAAGTACTCATTTGGTGCGGGGACTCAAGTCATAGAATCTCCTCTGACGCGACAACCTTTTTCTCCCATCTCTTCTAATGTATCTTCAAAATCTAATATGTCAAATGCTGCAGATGAACGGAATAAACAGAGTGAGAAGTTGCAGAAAACAGTGCCGCTTAACAATGTGCCATTTACTACTCCGATCAAGACAGCTTCTGTGGTAGATGAAGAGAATAGAACTCCAAAGGCTATGCCTATTCCTGTCCCAGCGACCCCTTCCACAGTATCAATTCCAATGAATATGGCCATGACTCCAGTTCCTTCATCAGTGTTGAAAAATATAAACTTAAATTCAACTCCCACATCCACATCAGTTCTTTATGGAGGTGACTTGGTTCAAGAGATTGAATATTCCTTTGAGGAAAAAAGGCTCAGTTATATGTTAGCATGA 2184 0.4203 MSKPQNDPLLQSETTCGTLLYELQIIWDEVGETESDRDRMLFELEQECLEVYRRKVDLANRSRAQLRQAIADCEAELAAICSSMGERPVHIRQSDQNAGSLKEEHARIIPQLEEMQKRKSERNSQFIEVQEQIQSISIEIYGTREYVPATVDETDLSLRKLEELHRQLHALQIEKSSRLQKVQEQLYTLNSLCLVLGLDFNQTISRIHPSLVDSEGSKSVSNDTIQQLAVAIQELREVKLQRMQKLQDLATTMLELWNLMDTPVEEQQMFQNVTCNIAASEHEVTEPNTLSVDFINCVEAEVARLEELKSSKMKELVLKKRTELEEICRKTHLVPEIDNAVEYAVDAIESGAVDPACVLEQIELQVAQVKEEAFSRKEILEKVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVNKIPAMVDALSSKTIAWEKEKGIEFTYDGIRLLSMLEEYTILRQEKEQERRRQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGPRMSTGGASSRRVSLGGAMLQTPKPDSKATHARAMRKMDKAHQIEHLNYLDDGVSCLSPARRGLDIAGVPVKKYSFGAGTQVIESPLTRQPFSPISSNVSSKSNMSNAADERNKQSEKLQKTVPLNNVPFTTPIKTASVVDEENRTPKAMPIPVPATPSTVSIPMNMAMTPVPSSVLKNINLNSTPTSTSVLYGGDLVQEIEYSFEEKRLSYMLA 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01705 727 Gene3D - 365 499 - -
Cca02g01705 727 MobiDBLite consensus disorder prediction 605 622 - -
Cca02g01705 727 Coils Coil 295 315 - -
Cca02g01705 727 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 634 - -
Cca02g01705 727 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 634 IPR007145 GO:0000226|GO:0008017
Cca02g01705 727 Coils Coil 458 488 - -
Cca02g01705 727 MobiDBLite consensus disorder prediction 605 630 - -
Cca02g01705 727 MobiDBLite consensus disorder prediction 500 523 - -
Cca02g01705 727 MobiDBLite consensus disorder prediction 493 540 - -
Cca02g01705 727 Coils Coil 49 76 - -
Cca02g01705 727 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01705 Cca-Chr2 36014691 36020380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01705 11 539 EF-hand Containing Proteins AT5G62250 58.627 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01705 K16732 - gmx:100777734 1231.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01705 02 36014691 36020380 Cca08g00520 08 8437270 8444400 ECH
Cca02g01705 02 36014691 36020380 Cca02g01705 02 36014691 36020380 ECH
Cca08g00520 08 8437270 8444400 Cca02g01705 02 36014691 36020380 PCT