Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01701 ATGATCTGGACGAAAAAGACACGTGGCAAGGGTCCTGGAGCTGATTTCCATTCCATGCCATGCATCGAATTGTCCTATATAAACCAAAACGAACTAAACCCCCATTCGTTTTCATTCGCGCAATTCCTCAAACACCTTCATGCAGCTCCCGTGGCGGGGCTAGCCTCAGCAATGGcctccacctccacctccaccgccaccgccgacctccaccCGGACGACGCGGCGGCCAGGGCGGTGCGGAAGCGCTACGAGGGCCTCCTCACAGTCCGCACGCGCGCCATCAAGGGCAAAGGCGCCTGGTACTGGGCCCACCTGGAGCCCATTCTCGTGAACAACGCCGTGAAGCTCAAGTGCTCCCTCTGCGACTCTCTCTTCTCCGCCTCCAACCCTTCCCGCACCGCTTCCGAGCACCTCAAGCGCGGCACGTGCCCCAATTTCAACCACTCCTCGTTGCCTTCGCCTTCTCCCATTTCCACCGTTCTCTCCCATTCCAACAACGGTAGAAAGAGAACCTCAACGTCTCCCAATCAGGACCCTTCCCTTCACCATTTGGTCTTGTCCGGTGGCAAGGACGATTTGTGCGCTCTCGCTGTTTTCGAAGACAGTGTCAAGAAGCTCAAGAGTCCTCGTAATTCCTCAAATGTTGCTCCTCCTGAGTTGACCAAGGACCAGGTTAACTCCGCCCTTGAGTTGTTAGCAGACTGGTTCTACGAGTCTTGCGGCTCTGTGCCTCTCTCTGCACTCGAACACCCCAAGTTTCAATCTTTTCTTACCCAGCTGGGTTTGCCCCTCGCTCTGTTGAGGCGCGAGATATATGGTTCTAGGCTCGATGATAGGTTCGGAGTGGCCAAGGCTGAGTCCGAAGCTAGAATCAGAGATGCCCTTTTTTTCCAAGTAGGCTGTGATGGTTGGAAGGCTGAGGATGGTGTGGTGAAGTTCACGGTGAATCTTCCCAATGGGTGTAGCGTGTTCCACAAGGTGGTGTTTTCCGGCGGAGGAGTGGTGGTGTCTTCCAAGTATGCTGAGGAGATTTTGTGGGAGGTGGTGAGGGGTGTTTGTGGGAGTGATGTGAAGAGGTGTGTGGGGATTGTTGGGGACAGGTTTAAGGCCAAGGCGTTGAGGAACTTGGAGGTTCAGAATCATTGGATGGTTAATGTTGCTTGTCAGCTTCAGGGATTCATGGCTTTGATCAAGGATTTCAGCAACGAGCTCCCACTTTTCAGGGTTGTTGCTGAGAATTCTCTCAAGGTTGCTAATTTTATCAACACTGAGTCTCAGGTTAGGAGTAGTTTTCTCAGGTACCGGATGCAGGAGCTGGACTGTGCTGGGCTGGTTCGAGTTCCCTCGCCGAAATGTCGCGTGTTGAAGGACTTCGCATCTGTGTTTCCGATGCTGGAGGACATCCTGAGCTGTGCTGCGGTGATCCAAATGGTGGTGTTGGAAGATACTTTTAAGGTGGCATGCATGGAGGATCCACTGGCCAGAGAGGTTGCTGGAATTGTTCAGAGTGAGGGGTTTTGGAATGAACTGGAGGCGGTTTATTCGCTGGTGAAACTCATCAGAGGAGTGGTTCAGGATATTGAGTCGGAGAGGCCGTTGATTGGTCGGTGCCTGCCGCTCTGGGAGGAGGTTAGAACCAAGGTGAAGGAGTGGTGTGCCAAGTACAGTGTTGTGGAAGAACCCGTGGAGAAAATACTTGAGAAACGGTTCCGAAAGAATTATCACCCTGCATGGTCTGCTGCATTTATACTTGATCCACTTTACTTGGTTAAAGATGCAAACGGAAAGTACCTTCCTCCATTCAAGTGCTTAACTCGTGAACAAGAGAAAGATGTAGATAAGTTATTGACTAGACTAGCTTCACGAGAAGAAGCTCATGTTGTGTTGATGGAGCTCATGAAGTGGAGATCAGAAGGGCTTGACCCCCTTTATGCTCAGGCTGTGCAGATGAAACAACGAGACCCGGTTACTGGGAAGATGAAAGTTGTAAATCCACTCAGTAGTAGACTTGTTTGGGAAACTTGCCTCAGCGAGTTTAAATCCCTGGGGAAGCTTGCAGTGAGGCTCATTTTTCTGCATGCAACCTCGTGTGGATTTAAGAGTAATTGTACTTTCATCAGGAAGATTTCTGAACATAAGCACTCGAGAGTTTCCTTGGAAAGAGCTCAGAAAATGATATATATTGCGGCTCATGCCAAGCTTGAAAGACGAGACTTTTCCAATGAGGAAGAGAAGGAAGCAGAACTGCTTGCCATGGTAGGCAGTGATGATAGCATGCTGGCTGAGGTATTTGCTGATGCACCCCTAATAGAGGTGGGATTGCTTGAAGCAGTAGGGTGGGTGGCAAACCGGACTTGGTCATGA 2367 0.4977 MIWTKKTRGKGPGADFHSMPCIELSYINQNELNPHSFSFAQFLKHLHAAPVAGLASAMASTSTSTATADLHPDDAAARAVRKRYEGLLTVRTRAIKGKGAWYWAHLEPILVNNAVKLKCSLCDSLFSASNPSRTASEHLKRGTCPNFNHSSLPSPSPISTVLSHSNNGRKRTSTSPNQDPSLHHLVLSGGKDDLCALAVFEDSVKKLKSPRNSSNVAPPELTKDQVNSALELLADWFYESCGSVPLSALEHPKFQSFLTQLGLPLALLRREIYGSRLDDRFGVAKAESEARIRDALFFQVGCDGWKAEDGVVKFTVNLPNGCSVFHKVVFSGGGVVVSSKYAEEILWEVVRGVCGSDVKRCVGIVGDRFKAKALRNLEVQNHWMVNVACQLQGFMALIKDFSNELPLFRVVAENSLKVANFINTESQVRSSFLRYRMQELDCAGLVRVPSPKCRVLKDFASVFPMLEDILSCAAVIQMVVLEDTFKVACMEDPLAREVAGIVQSEGFWNELEAVYSLVKLIRGVVQDIESERPLIGRCLPLWEEVRTKVKEWCAKYSVVEEPVEKILEKRFRKNYHPAWSAAFILDPLYLVKDANGKYLPPFKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQRDPVTGKMKVVNPLSSRLVWETCLSEFKSLGKLAVRLIFLHATSCGFKSNCTFIRKISEHKHSRVSLERAQKMIYIAAHAKLERRDFSNEEEKEAELLAMVGSDDSMLAEVFADAPLIEVGLLEAVGWVANRTWS 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01701 788 MobiDBLite consensus disorder prediction 146 182 - -
Cca02g01701 788 MobiDBLite consensus disorder prediction 146 183 - -
Cca02g01701 788 SUPERFAMILY Ribonuclease H-like 355 736 IPR012337 -
Cca02g01701 788 PANTHER OSJNBA0013A04.12 PROTEIN 70 767 - -
Cca02g01701 788 PANTHER PUTATIVE ISOFORM 1-RELATED 70 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01701 Cca-Chr2 35976137 35980793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01701 - - gmx:100790244 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01701 02 35976137 35980793 Cca08g00514 08 8293900 8297594 ECH
Cca02g01701 02 35976137 35980793 Cca02g01701 02 35976137 35980793 ECH
Cca08g00514 08 8293900 8297594 Cca02g01701 02 35976137 35980793 PCT