Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01699 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTACCTCAGCACTTTGAAAATGGGTCAAAAGGGAAAAGAGCCAGATGTGGCTGAGTTTATATCAGCACTAGCTGCAGGAAACAATGCACAACACATGGTTGTGGCATGTGCTGGTGCAGCAGACTCCACCACACTAGCATTGGTTGCTGCTGCTCATCAAACTGGTGGCCAAGTCATTTGCATTGTCCCTTCCCATGAAGCCCTAAGAGCCTCCAAACATGCCTTGGGAGTGGCCTCTCATCAAGTTCAATTCATGGTTGGAGAAGCTCAACAGCTTCTGCAAGACCACTATGATCAGGAAGCAGATTTTGTGCTTGTTGACTGCAACCTTGGGAGCCATGAAGAGATCCTCAAAGCATTCCAAGAGGGTAGGAAGCAAAGTGGCACAGTGGTTGTGGGGTACAATGCTTTTAGCTGCACAAAGTCTTGTTTGTCAAGTGGGTCAAAAACACAGCTTCTTCCTATAGGAGAAGGGCTTCTAGTGACTAGATTTGGAGCCACTCAAACAAGTCCTAAATATGGCAGCAGAAATATGGGGAAGGTCAAAAGCCGTTGGGTTGTCAAGGTAGATAAATGCACTGGCGAGGAACATGTGTTCAGGGTCAGATTTCCTCACGGAAAAGTCATCCAAGCTTAA 672 0.4717 MACWSAENATKAYLSTLKMGQKGKEPDVAEFISALAAGNNAQHMVVACAGAADSTTLALVAAAHQTGGQVICIVPSHEALRASKHALGVASHQVQFMVGEAQQLLQDHYDQEADFVLVDCNLGSHEEILKAFQEGRKQSGTVVVGYNAFSCTKSCLSSGSKTQLLPIGEGLLVTRFGATQTSPKYGSRNMGKVKSRWVVKVDKCTGEEHVFRVRFPHGKVIQA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01699 223 Pfam Protein of unknown function (DUF1442) 3 212 IPR009902 -
Cca02g01699 223 Gene3D Vaccinia Virus protein VP39 6 175 IPR029063 -
Cca02g01699 223 PANTHER BNAA09G06020D PROTEIN 1 223 - -
Cca02g01699 223 PANTHER DUF1442 FAMILY PROTEIN 1 223 IPR009902 -
Cca02g01699 223 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 20 136 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01699 Cca-Chr2 35948158 35949248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01699 - - gmx:100775961 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01699 02 35948158 35949248 Cca02g01699 02 35948158 35949248 ECH
Cca08g00511 08 8246343 8247759 Cca02g01699 02 35948158 35949248 PCT