Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01693 ATGGCATCATCATTTGTGGGTACTTTATTACCAAACCACTTCACACAAGCCAAACATTCAGCGGTTCCAACAAGGAGGAGAGTGCACTTAGCAACAAGAGCAGAGAGCTTGACTACTGTCATAGAGAAACTGGGCATCAAGATTGAGAGGAACCCTCCTGAGTCCAAACTCACTCAACTCGGTGTTAGACAATGGCCCAAATGGGGTTGCCCTCCAAGCAAATTTCCATGGACATATGAAGCCAAAGAAACTTGCTATCTTTTGGAGGGAAAAGTGAAGGTGTTTCCAAGTGGGTCAAATGAGTCAGTTGAAATTGCTGCTGGTGACTTGGTTGTGTTTCCTAAAGGGATGAGTTGCACTTGGGATGTATCTGTTGGTGTGGATAAGCACTACAAATTTGAATAA 405 0.4395 MASSFVGTLLPNHFTQAKHSAVPTRRRVHLATRAESLTTVIEKLGIKIERNPPESKLTQLGVRQWPKWGCPPSKFPWTYEAKETCYLLEGKVKVFPSGSNESVEIAAGDLVVFPKGMSCTWDVSVGVDKHYKFE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01693 134 Pfam EutQ-like cupin domain 58 131 IPR008579 -
Cca02g01693 134 Gene3D Jelly Rolls 33 133 IPR014710 -
Cca02g01693 134 PANTHER OS04G0445200 PROTEIN 21 134 - -
Cca02g01693 134 SUPERFAMILY RmlC-like cupins 53 131 IPR011051 -
Cca02g01693 134 CDD cupin_TM1112-like 65 133 - -
Cca02g01693 134 PANTHER OS04G0445200 PROTEIN 21 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01693 Cca-Chr2 35888860 35890029 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01693 K06995 - gmx:100499968 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01693 02 35888860 35890029 Cca02g01693 02 35888860 35890029 ECH
Cca08g00507 08 8179633 8186286 Cca02g01693 02 35888860 35890029 PCT