Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01690 ATGGAAGTGACAAGTGTTGTTCACTCAGTTGGATTTCTGCATTCACCAACACACATTCAAAGGCTTAACGGTAAACCTTTCTTCCTCTCCACAAGACCAAGGAAAGTGAATCTTCCTCTTCCATGTCACCAATATCCAAACTACTTGAGCAATGCCAAAAGTGGTTGTAGTGATAGAACAAGTGTCATATTCAACTCCACTTCTGCTACTTCCACAGCAACCTCTGCTGCTGAGGGATCCCTCTCTGAGGCGGAAAAGATAAAGCAAAGGTGCCTCAAATGGCAGTGGAAGGGTCAGTATTCCATCAACTACTTTGTTTCTTCTGATTCTCCTCAGAAGTTGCTTGACAATCAACCTCCTCTGTTACTTGTTCATGGCTTCGGTGCCTCCATTCCTCACTGGCGCAGGAATATCAAGACACTGGCCCAGAATTATACTGTTTATGCTATTGATCTTCTTGGTTTTGGTGCTTCAGATAAGCCTCCAGGCTTTCAATATACCATGGAAACATGGGCTCAGTTGATCTTGGATTTCTTGAATGAAGTTATTCAAAAGCCAACTGTACTAATAGGAAACTCAGTTGGAAGTCTAGCTTGTCTGATTGCTGCCTCAGATTCAAGTCAAACTCTTGTTAGAGGCATTGTGCTGTTAAATTGTGCTGGTGGCATGAACAACAAAGCAATTGTAGATGACTGGAGGATCAAGTTACTACTACCCTTGCTTTGGCTGATTGATTTTTTACTGAAGCAAAAGGGAATTGCCTCAGCAATTTTTGAGAGGGTTAAACAAAGAGAGAATTTGAGAGACGTTTTGAGTTCAGTGTATGGAAACAAGGAGTCTGTGGATGAAGAATTGGTGGAGATCATAAGGGAACCAGCTAATAGTCCAGGGGCCTTAGATGCATTTGTGTCCATTGTAACGGGGCCACCGGGGCCGAATCCGGTGTTGTTGATGCCTAAAATTTCCATGCCTGTTTTGCTTTTATGGGGAGATGAAGATCCTTTCACTCCAATTGATGGACCTGTTGGCAAGTACTTTTCTTCATTGCCTTCTCAACAAGAAAATGTTAAACTCTTCTTGCTTGAAGGGGTTGGACATTGTCCCCATGATGATAGACCTGACTTGCGTGCTCGAAGGCATAACATTTCAGTACCATACTCCAACCAAGTTGCCACCATTATCCATCATTGTCTACCACTACTTGTTCCCTTAGTAATATCAATGAGGCTACAACACCTCAACTTGTTCTTTTTGTTGCTCTTTGTTGCCAAAGCAAATGGGTCTCTGCTCCCATTCATAGATCCTCCCAGCACTCTCTTGACCGATCTGTGGTCTGATCGCTTCCCTGACCCATTTCGCGTGCTGGAACAAATTCCATTTGGGATTGAGAAAGATGAAGCATCCACGGCCATGTCACCTGCTAGAGTGGACTGGAAGGAGACCCCAGAGGGGCATGTTATAATGATTGATGTGCCGGGGTTgaagagagaagagataaagatagaggtggaagagaatagggtgctgagggtgagtggtgaaaggaagagggaggaggagaagaaggGGGATCACTGGCACAGAGTGGAGAGGTCCTGTGGCAAGTTCTGGAGGCAGTTCAGGTTGCCACAAAATGTGGACTTGGATAGTGTCAAGGCTAGGCTGGAGAATGGGGTGCTTAGTTTGACACTTGATAAGTTGTCACCTGATAAGATCAAGGGTCCCAGGGTGGTGAGCATTGCTGGGGAGGATCACCAACAAGCCAGGCTCAACAGTGATGGGGCCACTGCCAAGCAGGAGCTTTGA 1806 0.4302 MEVTSVVHSVGFLHSPTHIQRLNGKPFFLSTRPRKVNLPLPCHQYPNYLSNAKSGCSDRTSVIFNSTSATSTATSAAEGSLSEAEKIKQRCLKWQWKGQYSINYFVSSDSPQKLLDNQPPLLLVHGFGASIPHWRRNIKTLAQNYTVYAIDLLGFGASDKPPGFQYTMETWAQLILDFLNEVIQKPTVLIGNSVGSLACLIAASDSSQTLVRGIVLLNCAGGMNNKAIVDDWRIKLLLPLLWLIDFLLKQKGIASAIFERVKQRENLRDVLSSVYGNKESVDEELVEIIREPANSPGALDAFVSIVTGPPGPNPVLLMPKISMPVLLLWGDEDPFTPIDGPVGKYFSSLPSQQENVKLFLLEGVGHCPHDDRPDLRARRHNISVPYSNQVATIIHHCLPLLVPLVISMRLQHLNLFFLLLFVAKANGSLLPFIDPPSTLLTDLWSDRFPDPFRVLEQIPFGIEKDEASTAMSPARVDWKETPEGHVIMIDVPGLKREEIKIEVEENRVLRVSGERKREEEKKGDHWHRVERSCGKFWRQFRLPQNVDLDSVKARLENGVLSLTLDKLSPDKIKGPRVVSIAGEDHQQARLNSDGATAKQEL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01690 601 SUPERFAMILY alpha/beta-Hydrolases 88 377 IPR029058 -
Cca02g01690 601 Pfam Alpha/beta hydrolase family 121 376 IPR000073 -
Cca02g01690 601 PRINTS Alpha/beta hydrolase fold signature 144 159 IPR000073 -
Cca02g01690 601 PRINTS Alpha/beta hydrolase fold signature 325 339 IPR000073 -
Cca02g01690 601 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 59 376 - -
Cca02g01690 601 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 59 376 - -
Cca02g01690 601 Gene3D - 435 581 IPR008978 -
Cca02g01690 601 ProSiteProfiles CS domain profile. 471 578 IPR007052 -
Cca02g01690 601 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 465 583 IPR002068 -
Cca02g01690 601 CDD ACD_ScHsp26_like 475 566 - -
Cca02g01690 601 Pfam Hsp20/alpha crystallin family 477 580 IPR002068 -
Cca02g01690 601 SUPERFAMILY HSP20-like chaperones 467 576 IPR008978 -
Cca02g01690 601 Gene3D alpha/beta hydrolase 66 379 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01690 Cca-Chr2 35872238 35876417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01690 116 373 Miscellaneous Gene Families AT1G80280 28.214 2.34e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01690 - - gmx:100775473 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01690 02 35872238 35876417 Cca02g01690 02 35872238 35876417 ECH
Cca08g00500 08 8120654 8121680 Cca02g01690 02 35872238 35876417 PCT