Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01575 ATGTCCAAACCACCCACCGCCGGCTACGGTACCGTCGCCGGCGccacctccaccgccaccactccaaccaccaccaccaccaccaccaccaccaccTCCTCCGTCACTCCCCGTCCATGGCGCGAGTTCCTGGACCTATCGGCCCTCTCCCGCCCCTACTCCTACGACGAGGCCATGATTCGGCTCCGCAGAAACCTGAACTACTTCCGATTCAACTACGCCGGCGTGACGCTTCTCATCGTGTTCCTGAGCCTCCTCTGGCACCCTCTCTCCATGATCGTCTTCCTCCTCCTCTTCGTGGCCTGGTACTACTTCTACTTCTCCCGCCACGGCCCTCTCGTAATCCTCAACCAAACCTTCGACGATCGAACCGTCATCTGCGTTTTGGGTTTGGTCACCGTCGTTTCGCTCGTCTCCACCCACGTCGGCCTCAACGTCTTGGTCTCCTTGATTCTCGCCGTTTTGCTCCTTGGCCTCCACGCCGCGTTTAGGGTTACCGAAGATTTGTTCCTTGACGAGGAAAGTGGGTTGCTTTCCGTTGTGGGTACTCAGCCTCTCAGAACTAATTACACCCCCATTTGA 582 0.5241 MSKPPTAGYGTVAGATSTATTPTTTTTTTTTTSSVTPRPWREFLDLSALSRPYSYDEAMIRLRRNLNYFRFNYAGVTLLIVFLSLLWHPLSMIVFLLLFVAWYYFYFSRHGPLVILNQTFDDRTVICVLGLVTVVSLVSTHVGLNVLVSLILAVLLLGLHAAFRVTEDLFLDEESGLLSVVGTQPLRTNYTPI 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01575 193 MobiDBLite consensus disorder prediction 1 33 - -
Cca02g01575 193 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 18 191 IPR004895 -
Cca02g01575 193 MobiDBLite consensus disorder prediction 11 33 - -
Cca02g01575 193 Pfam PRA1 family protein 35 174 IPR004895 -
Cca02g01575 193 PANTHER PRA1 FAMILY PROTEIN 18 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01575 Cca-Chr2 34426657 34427238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01575 K20359 - gmx:100809527 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01066 02 27619104 27624885 Cca02g01575 02 34426657 34427238 ECH
Cca02g01575 02 34426657 34427238 Cca02g01575 02 34426657 34427238 ECH