Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01429 ATGGACTCCAACAATAAGAATGGGTTGGAGGAGTTGGACAGCAGCTGCTCCACTCCTTACGTGAGCGCCCCTTCCAGCCCCGGCCGAGGCCCTCTCCCCGCCTTCTTCTACAGCGCCCCCGCCAGCCCTATGCACTTCGCCATCACCGCTTCCTCTTCCTCTTCCTCTTCCTACCAGGCCCCCTCCGCTTCCGCCGCTCCCATCGGCTACGAGTTCGAATTCTCCGCCCGCTTCGGCTCCTCCGCTTCCGCCGCCCCCGGTTCCATGAGCTCGGCCGACGAGCTCTTCCTGAACGGGCAGATCCGCCCCATGAAGCTCTCTACCCACCTCCAACGCCCCCAGGTGCTGGCCCCCTTGTTAGATCTGGATGAAGACGAACAAGAGGAGGAGGAGGGTGTGAGTGTGAACGTGGTCCGAGGCAGAGATCTGAGGCTCAGGGACAAGTCCCTCCGCAGAAGAACCAGATCCATGTCCCCTCTCAGGACCAACACGCCTTTCGACTGGTCCCAACACCATCACCATCACCATCACCAACCCCTCCACAACCAAATAAATAAAGCCCAGGAAAAACCCGAGGAtccttccgcctcctcctcccgctcctcttccGCTGGGAGAAGCTCCAAGCGCTGGGTTTTCCTTAAGGATTTTCTCCGAAGCAAAAGCGAAGGCCGCAGTAACAACAAGTTCTGGTCCACCATTTCCTTCTCCCCCATCAAGGACAAGAAATCCACCAAGCCCACTCACCataataataataataataataataataGTGACAACAAAAACGGGCCTCCTTCCAAGAGAATGAGCGGCAAGCCCACCAACGGTGTTGGGAAGAGGCGCGTGCCTCCTTCGCCGCACGAGTTGCACTACAAAGCCAACCGGGCCCAAGCCGAGGAGTTGAGGAAAAAGACCTTCCTGCCTTACCGCCAGGGCCTGCTTGGCTGCTTGGGCTTTAGTTCTAAGGGTTACGGGGCCATGAACGGCCTTGCTAGAGCCTTAAACCCTGTTTCCTCCAGTACAATGGTTCTTCCTGAATTCCCAAAAGATCATGGGCACAGAGATATTGAAACAGGAAAGCATGCGGAGTCCCTAAGCCAACAGTCTGTTGTGTGTGGTTAG 1125 0.5431 MDSNNKNGLEELDSSCSTPYVSAPSSPGRGPLPAFFYSAPASPMHFAITASSSSSSSYQAPSASAAPIGYEFEFSARFGSSASAAPGSMSSADELFLNGQIRPMKLSTHLQRPQVLAPLLDLDEDEQEEEEGVSVNVVRGRDLRLRDKSLRRRTRSMSPLRTNTPFDWSQHHHHHHHQPLHNQINKAQEKPEDPSASSSRSSSAGRSSKRWVFLKDFLRSKSEGRSNNKFWSTISFSPIKDKKSTKPTHHNNNNNNNNSDNKNGPPSKRMSGKPTNGVGKRRVPPSPHELHYKANRAQAEELRKKTFLPYRQGLLGCLGFSSKGYGAMNGLARALNPVSSSTMVLPEFPKDHGHRDIETGKHAESLSQQSVVCG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01429 374 MobiDBLite consensus disorder prediction 249 270 - -
Cca02g01429 374 MobiDBLite consensus disorder prediction 1 24 - -
Cca02g01429 374 PANTHER - 9 336 - -
Cca02g01429 374 MobiDBLite consensus disorder prediction 239 288 - -
Cca02g01429 374 Pfam Protein of unknown function (DUF1645) 92 309 IPR012442 -
Cca02g01429 374 MobiDBLite consensus disorder prediction 189 206 - -
Cca02g01429 374 MobiDBLite consensus disorder prediction 1 27 - -
Cca02g01429 374 MobiDBLite consensus disorder prediction 154 206 - -
Cca02g01429 374 PANTHER EXPRESSED PROTEIN 9 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01429 Cca-Chr2 32822651 32826305 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01429 - - gmx:100805542 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01429 02 32822651 32826305 Cca02g01429 02 32822651 32826305 ECH
Cca01g00468 01 5847707 5849892 Cca02g01429 02 32822651 32826305 PCT