Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00468 ATGGATCATAGGAGTTGTCTTCTTGTTTTTATTTTGCTCTCGTTATTGTTAAGAAGTGAGTCATGGGGTTGGTTTTCATCATCTAAGGAGACTCCCTCTAGTGACAGGACTTATGCCAATGAAGGCAATTTTAGAGGTTCTAGTGCTGAGTTCTCTATTGAGGCCTTCAACGACCAAAAGGGAACAAAGTTAATACATAATGCTAAGCAGAAAATGATTAGCTCAAACTCGTGTTGGCAAAATGCTTATCAACATCTTTTTGCTGGGTGCTCTGAAATCTTGGCTGTTGATGAGAAGAGGTCTAGATTGGCTTGGCACCTAAGTGATTGCTTTCAGAGGGATTCTGGCAGATCTCCCTTTCCCCATTGTGACCCCAAATCCTCCATTGCTGTATGTGCAAGAACCTTAGATGACCTTGCCCATAAGGTTTACCTTGAATTCTACCTTGAAACCAACACCATTTGTTATCAGTTGCAGGCACATGCATTCAAACACGAAACACAGAGACTTGTGACTGAATTAAAAAGTTCTGCACAGTATGTTGAGGACAAGTTAGATAGCATTGAAGAGAAATCAGAGCATCTATTAAAAGACTCGCAACAGATTCATGATTCTCTTGATTCAATTGGTACTCACACACAACTAGTGGCTCAAACTGCTAAAAATCTGGAAGGTCACATAGATTCTGTATTACTGCATTCAAAGAGTGTTTACGAGCAAACTACAAAAATTGCACTGTCACAATCACAGTTACAAGAAGGGCAAGAGGATATGAAGAGACATTTGGAGGATGGCGTGGCAATGCTCAAAGACTCTTACAATTATTTGGGCAAAGAGATTGAAAAGTTAAGAGATGAAGCCATTGAGATCGAAAACGAGGTAATTAAAGTTGGAGATGCTATGTCATCAAAGATGAACAACCTGCAAAGCAAAGCTGAAGATATTGGGAATATGGCTGGGATTTCCTTAGATAAGCAACAGCAACTTTTAGATGGGCAATCCACAGCACTTGAGGGCCTAAACTCATTGACTGAGTTTCAATCAAAAGCACTAGAAGAGAGCAGGAAAACCCTACAATATTTTGCTGAATATGGGCATAGACAACATGAAGAGCTTCTTCAGCGTCAGGAACAGATTCAAGGATTTCATGATCGTTTAATGGAAAACTCTAAGTCAATATTGTCATCTCAGGAATCTTTTGAATCAAAGCAGGCTACCATGTTTGATGTTTTAGACAGGATTTTTGCTTTGCAAAATGCCTTGTTGCTTGAATCAAGAATGATCAAAGCTTTCTTCATTTATTCCATATCAATCTTTGTCATCTTCATGTTGACTAGTACAAAGCAAACATACAATATCAGACCGTTCCTATATATGGAGCTTTGTGGTACTTTCTTATTGGAAGTACTCATTATTCGTTTAACAAGAGATACCATTGAGCATCAAACCTGGATAATAAACATGGCTCGATTATTTTTCATGGCAGCTGCTTCAGTTCAACTTCTACATGCCATTTGCACATACAAGGACTATGAAACGTTGAACCATCAGATGCTGCAAACTCTGATCAACAAGGTTAACAGCATGCAAAAACAAAAGGAGTTGCTATGGGACGTGGATACTGATTATGATGAGGATTGGTCTCAATGGGTTGATGCCGATTTACCGGATGATGTGAATTGCCTTGATGATCCTGACTATATACTTCCAGAAGAAGTTGCAGAGAATTCAATGATAACTAAGAAAAATTATAATCTACGCCATCGCAGTCTTTTTCATTGA 1782 0.3878 MDHRSCLLVFILLSLLLRSESWGWFSSSKETPSSDRTYANEGNFRGSSAEFSIEAFNDQKGTKLIHNAKQKMISSNSCWQNAYQHLFAGCSEILAVDEKRSRLAWHLSDCFQRDSGRSPFPHCDPKSSIAVCARTLDDLAHKVYLEFYLETNTICYQLQAHAFKHETQRLVTELKSSAQYVEDKLDSIEEKSEHLLKDSQQIHDSLDSIGTHTQLVAQTAKNLEGHIDSVLLHSKSVYEQTTKIALSQSQLQEGQEDMKRHLEDGVAMLKDSYNYLGKEIEKLRDEAIEIENEVIKVGDAMSSKMNNLQSKAEDIGNMAGISLDKQQQLLDGQSTALEGLNSLTEFQSKALEESRKTLQYFAEYGHRQHEELLQRQEQIQGFHDRLMENSKSILSSQESFESKQATMFDVLDRIFALQNALLLESRMIKAFFIYSISIFVIFMLTSTKQTYNIRPFLYMELCGTFLLEVLIIRLTRDTIEHQTWIINMARLFFMAAASVQLLHAICTYKDYETLNHQMLQTLINKVNSMQKQKELLWDVDTDYDEDWSQWVDADLPDDVNCLDDPDYILPEEVAENSMITKKNYNLRHRSLFH 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00468 593 PANTHER PROTEIN GAMETE EXPRESSED 1 6 589 - -
Cca01g00468 593 Coils Coil 273 300 - -
Cca01g00468 593 PANTHER PROTEIN GAMETE EXPRESSED 1 6 589 IPR040346 -
Cca01g00468 593 Coils Coil 171 191 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00468 - - gmx:100814301 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00468 01 5847707 5849892 Cca02g01429 02 32822651 32826305 PCT