Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01405 ATGTCTCTAGTGACCGCAGAGATCAAAGCCAAATCAGAGGTGTACCATGGAGATGAACTCTGCAGAGAAAAGTCCAAGTTACTGTTGAAGGAAGTAGGGCTACCCAATGGTCTTCTGCCCTTGAAGGACATTGAGGAAGTAGGGTACGAGAAGGAAAGTGGGTTTGTGTGGCTGAAGCAGAAGAAGTCCATAAACCACAAGTTTGAGAAGATTGGGAAGCTAGTGTCCTATGCTCCTGAGATCACAGCCTATGTTGAGCTTGGCAAGATAAAGAAGCTGACTGGTGTGAAGACCAAGGAGCTCTTGGTTTGGATCACACTGAATGAGATCTTTGTTGATGATCCACCCACTGGGAAGATCACATTCAAGACCCCTTCAGGGCTTTTCAGGACATTCCCAGTCTCAGCTTTTGAGGTTGAAGAGCCAGTTAAGGAAGTgaagaaggataaggaggaacaagttaaggaagtgaagaaggaagaagaaCACAACAAGGAAGTCAACCAAGTTGCTACTGCTGTTAAAGTCCAAGAGTTCCTAATATAA 546 0.4139 MSLVTAEIKAKSEVYHGDELCREKSKLLLKEVGLPNGLLPLKDIEEVGYEKESGFVWLKQKKSINHKFEKIGKLVSYAPEITAYVELGKIKKLTGVKTKELLVWITLNEIFVDDPPTGKITFKTPSGLFRTFPVSAFEVEEPVKEVKKDKEEQVKEVKKEEEHNKEVNQVATAVKVQEFLI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01405 181 Coils Coil 143 170 - -
Cca02g01405 181 SUPERFAMILY At5g01610-like 3 144 IPR036758 -
Cca02g01405 181 Gene3D - 5 149 IPR036758 -
Cca02g01405 181 PANTHER T31J12.3 PROTEIN-RELATED 2 161 IPR007493 -
Cca02g01405 181 Pfam Protein of unknown function, DUF538 28 138 IPR007493 -
Cca02g01405 181 PANTHER PLANT/F25P12-18 PROTEIN 2 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01405 Cca-Chr2 32542188 32542958 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01405 - - ccaj:109788994 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01405 02 32542188 32542958 Cca02g01405 02 32542188 32542958 ECH
Cca03g02874 03 50031637 50032251 Cca02g01405 02 32542188 32542958 PCT