Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01403 ATGAACACAATTGCCCTTATTCGCAACCGCGCCATCAAATCCGCTCGCAGGATTCTCCTTGCTTCCCCAAATTCACCATTTTTTGCCTTCCCACCTGCAAAACCTCGTTTCAATCATCACCACCCTTTTCAAATTCATCGCACAAAGGGTAATGTTTTTGGCTTACCCTCTTCCAATTTTGTCCCTGTATCATTGCCTTGCAGTTTAAGCACAACGAATAGGGACGTCTTCACCTTCAAGGTTCGAAATTTCTCAACCACTGTTGAGACCCGTGTCAATGACAACAACTTTGAGAGGATTTACGTTCAGGGTGGCATCAATAATGTGAAGCCATTGGTGGTGGGAAGTGATGACAAGGATGATGAGAAAAATTTAGGTGGTGATGTGCATGTGACCAAAGGGGAGGACTCAGAGGTGGAAAAACAAGCATGGAAGTTGTTGCAGGGAGCTGTTGTGAGCTATTGTGGCAACCCTGTGGGGACTGTGGCTGCAAATGATCCTGGTGACAAGCTACCCTTGAATTATGATCAGGTCTTTATTAGGGATTTTGTCCCTTCAGCACTTGCTTTCTTGCTCAGGGGAGAACATGAGATTGTTAAGAACTTTCTTCTTCACACCTTGCAGTTGCAGAGTTGGGAGAAAACAGTGGACTGCTACAGTCCAGGCCAGGGCTTGATGCCTGCAAGTTTCAAAGTTAGAACTGTGGCTCTTGATGAAGATAATCATGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATTGGTCGTGTTGCACCTGTAGATTCAGGATTGTGGTGGATCATCCTCTTGCGGGCTTATGGGAAGCTCACTGGTGATTGCAGCTTGCACGAAAGGGTGGATGTTCAAACAGGATTAAGAATGATCCTTAAGTTGTGTTTAACAGATGGTTTTGATATGTTTCCTTCTTTGCTAGTCACCGATGGGTCTTGCATGATAGATAGGCGGATGGGAATTCATGGCCACCCCCTTGAGATCCAAGCATTATTTTACTCCGCTCTTCGCTGCTCACGTGAGATGCTTGTTGCAACTGATGGAAGTGGAACCGATAATCTAATTAGGGCCATTAACAACAGACTCAGTGCGCTGTCATTCCACATTAGAGAATATTATTGGGTGGATATGAGAAAGATCAATGAAATATACAGGTATAAAACTGAAGAGTACTCCACTGATGCCATCAACAAATTCAACATCTATCCAGAACAAATTCCATTGTGGTTAATGGATTGGATTCCAGAAGAAGGTGGATATCTGATTGGCAATTTGCAGCCAGCTCACATGGACTTCAGGTTTTTCACCCTTGGAAATCTTTGGTCTATCGTCTCATCATTGGGCACCCCAAGACAGAACCAGGCTATTTTAAATTTGATAGAAGCAAAATGGGATGATCTTGTGGGCCATATGCCTCTAAAGATATGTTATCCTGCCTTTGATAATGAAGAGTGGCGCATAATTACTGGCTGCGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCAACCCTTCTGTGGCAGTTCACGCTGGCATGCATCAAAATGGGGCGAATTGAACTTGCTCAGAAAGCCGTTGCTTTGGCTGAGAAAAGACTGCCAGTTGATTCTTGGCCGGAATACTATGATACGCGTACTGGAAAATTTATTGGAAAACAATCGCGGCTATATCAAACATGGACTATAGCTGGTTTCCTTACGTCCAAGATGCTTTTGAAGAATCCTGAGATGGCATCCATGTTATTCTGGGAGGAAGACTATGAGCTTCTTGACATATGTGTTTGTGGACTTAGCAAGAGGGGCAGGAAAAGGTGTTCTCGTGGTGCTGCAAGGTCTCAAATTCTTGTATGA 1878 0.4409 MNTIALIRNRAIKSARRILLASPNSPFFAFPPAKPRFNHHHPFQIHRTKGNVFGLPSSNFVPVSLPCSLSTTNRDVFTFKVRNFSTTVETRVNDNNFERIYVQGGINNVKPLVVGSDDKDDEKNLGGDVHVTKGEDSEVEKQAWKLLQGAVVSYCGNPVGTVAANDPGDKLPLNYDQVFIRDFVPSALAFLLRGEHEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALDEDNHEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDCSLHERVDVQTGLRMILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLVATDGSGTDNLIRAINNRLSALSFHIREYYWVDMRKINEIYRYKTEEYSTDAINKFNIYPEQIPLWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPRQNQAILNLIEAKWDDLVGHMPLKICYPAFDNEEWRIITGCDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAQKAVALAEKRLPVDSWPEYYDTRTGKFIGKQSRLYQTWTIAGFLTSKMLLKNPEMASMLFWEEDYELLDICVCGLSKRGRKRCSRGAARSQILV 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01403 625 PANTHER ALKALINE/NEUTRAL INVERTASE A, MITOCHONDRIAL 72 625 - -
Cca02g01403 625 SUPERFAMILY Six-hairpin glycosidases 142 576 IPR008928 GO:0005975
Cca02g01403 625 PANTHER - 72 625 IPR024746 GO:0033926
Cca02g01403 625 Pfam Alkaline and neutral invertase 143 584 IPR024746 GO:0033926
Cca02g01403 625 Gene3D - 174 576 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01403 Cca-Chr2 32511257 32515214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01403 - - gmx:100797025 1152.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01403 02 32511257 32515214 Cca02g01403 02 32511257 32515214 ECH
Cca03g02871 03 49983247 49990873 Cca02g01403 02 32511257 32515214 PCT