Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01395 ATGGGGTCTGAAGGTCCTTCAGCAGCAGTAACAACAGTTCATGTAACAGGTTTCAAAAAATTCCATGGAGTTTCAGAGAATCCTACAGAGACAATTGCCAATAATTTGACGGAGTATTTGAACAAGAAGGGTTTGCCAAAAGGCTTAGTTATTGGAGGCTGCAACATTCTTGAGACTGCTGGTCAAGGAGCACTTGTTCCTCTCTACCAGACATTGCAGTCTGCCATTACTTCCAAGGACACTGAATCTTCAAGTTCCAACAAAGTTATATGGCTGCATTTTGGAGTTAACAGTGGTGCAACAAGGTTTGCTATAGAGCATCAAGCTGTCAATGAGGCTACATTCCGCTGCCCTGATGAAATGGGATGGAAGCCCCAGAAAGTGCCTATTGTTCCTTCAGATGGTGCAATTACAAGAATACGGGAGGTAAATTGGATCACCAATTTTTCTCACACTTTAATTCCTAAACTAATTTTACTATTTGGCTGGTGTTAG 495 0.4182 MGSEGPSAAVTTVHVTGFKKFHGVSENPTETIANNLTEYLNKKGLPKGLVIGGCNILETAGQGALVPLYQTLQSAITSKDTESSSSNKVIWLHFGVNSGATRFAIEHQAVNEATFRCPDEMGWKPQKVPIVPSDGAITRIREVNWITNFSHTLIPKLILLFGWC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01395 164 PANTHER BNAA09G15240D PROTEIN 1 144 - -
Cca02g01395 164 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 144 IPR016125 -
Cca02g01395 164 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 135 IPR036440 -
Cca02g01395 164 Gene3D - 9 146 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01395 Cca-Chr2 32443516 32447039 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01395 K01304 - gmx:100305735 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01395 02 32443516 32447039 Cca02g01395 02 32443516 32447039 ECH
Cca03g02670 03 47993872 47997132 Cca02g01395 02 32443516 32447039 PCT