Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01384 ATGGCCAAGGAAGCTTCACTGTGCCTCTTGTTTCTCTCCTTTCTCATTATCTCGTGTTCTGGATCTCTGGTGGGTTTTTCCTACCGTGAGAGAGGAGACACTTCAACATCTGCTAGAACCATATCATTCCTTCAGCAAAACAACGTTTCATCCTCTCAGATTCGAATTTTCGTCACAGATCACAGGATTTTGAGCACTCTCAGCAACTCCAACGTGCCAACTGATTTGTACTTGAACAAAAGTGAAGTTGAAAATTTCATTACTTCTAAACCCTCTTCACTAAAACCTCATCTACTTAACTTTCTCCCACGTTTAAACATCAAGAGCATCATTGCTAGCTGTGGCAGTGAGTGCCTAGCAAAAAATGAGATGCCTTTGTTCTTGCATGCTTTGAAATCAATTGGTTCAGTTCTCAGGGAGCTTCACATAGAGAGGGAGGTAAAAGTCTCAGTAGCATTTCCACTTTCACTCTTGGAAAAGCTGAATGCATCACATGAAAACGATATCCGTAGGATTCTTTCATTTATAAAGGAAATGAAATCCTTTGTCATGGTAGAAGACAGTATTGATGGAGAATTTAGCATGGGAGATCACTTTGTTCATGCAATTATCAAACGAGCCACTCTTGCTGCTTCCATTCTTCCTTGCAAAGATGTTCCCCTTGTTATAACAATAAAAACCACAGTTATCAAGGAAATAACTCAATTTAGTGAGAGAGTATCCAAATCTCTAGAAGCAAAAACTCATATTACAAAAAGAATAGCTGCATTATATGCAGAGGTGTATACAACAGAAGATTTTGCAAGGAAAGAGGAAGAAGTGTTTCCTCTAAGTAAATCCAACAAAAGGAGAAGTCTAGATGACACAACCAACCCAACAAACACAGTTTTCCCCACAAATCCAGCATCATCTACACCAATCATTACACCCCCAGATACACCAACTATCATCACAGTTCCTGCCACAAATCCTGTCACAATTTCCCCCTCCAATCCTGCTGCAATGCCTGTGACAGTTCCTTCAACCACACCTGTGCCTCCAACTCCCACAAATCCAGCCAATTCACCAGTACCAGTGAGCAATCCAGCTACAACAACTCCTGTAGGGATACCACCACCAGTATCCAACCCTGTGACATCTTATCCACCTCCATCAGGGAATGCTCCTGTCATAAACCCTCAACCACAACCACCTCCTGCAAACACCAATGCTCCTGCCACTCAGGGACAGAGTTGGTGTGTGGCAAAGCAAGGAGCTTCTGAATCTGCTCTTCAATCAGCACTGGACTATGCTTGTGGAATGGGTGGGGCAGATTGTTCCCAAATACAGCAGGGTGGGAGTTGTTATAGTCCAGTTACTTTGCAGAACCATGCTTCTTTTGCCTTCAACAGCTACTACCAAAAGAATCCAGCTCCAACAAGCTGTGACTTTGGAGGGACTGCCACCATGGTTAACACAAATCCGAGTTCGGGTTCATGCATTTTCCCATCATCATCAGCATCATCAACTACAACAACGCCAAAGTCATCACCCCCAACACCACCTACACAATCAAGTCAAACAACACCACCACCAAGTCCAGTAACACCTTCTCCATCAATTCCAACAGTGCCACCACCAACATCGTCAACTTCCGGAACAGGCCCTTTCGGGTATGGTACCCCACCTTCAGTGTTAAATTCCAGCAATCCAGCCTCAGGTACAATGCCAGGTTTTGGGTCTGAAACCCCTCCTGTTGTAAATACAACGTCGGCATCACATTCTGTGGGTTTGAGACCTTCTCTTGGCTGCATTGTTCTGATGGTATCATTTGTCACTATGAGACTCACTATGCACCCATAG 1842 0.4387 MAKEASLCLLFLSFLIISCSGSLVGFSYRERGDTSTSARTISFLQQNNVSSSQIRIFVTDHRILSTLSNSNVPTDLYLNKSEVENFITSKPSSLKPHLLNFLPRLNIKSIIASCGSECLAKNEMPLFLHALKSIGSVLRELHIEREVKVSVAFPLSLLEKLNASHENDIRRILSFIKEMKSFVMVEDSIDGEFSMGDHFVHAIIKRATLAASILPCKDVPLVITIKTTVIKEITQFSERVSKSLEAKTHITKRIAALYAEVYTTEDFARKEEEVFPLSKSNKRRSLDDTTNPTNTVFPTNPASSTPIITPPDTPTIITVPATNPVTISPSNPAAMPVTVPSTTPVPPTPTNPANSPVPVSNPATTTPVGIPPPVSNPVTSYPPPSGNAPVINPQPQPPPANTNAPATQGQSWCVAKQGASESALQSALDYACGMGGADCSQIQQGGSCYSPVTLQNHASFAFNSYYQKNPAPTSCDFGGTATMVNTNPSSGSCIFPSSSASSTTTTPKSSPPTPPTQSSQTTPPPSPVTPSPSIPTVPPPTSSTSGTGPFGYGTPPSVLNSSNPASGTMPGFGSETPPVVNTTSASHSVGLRPSLGCIVLMVSFVTMRLTMHP 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01384 613 MobiDBLite consensus disorder prediction 339 356 - -
Cca02g01384 613 MobiDBLite consensus disorder prediction 327 408 - -
Cca02g01384 613 Pfam X8 domain 412 482 IPR012946 -
Cca02g01384 613 Gene3D Glycosidases 24 188 - -
Cca02g01384 613 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 140 578 - -
Cca02g01384 613 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 140 578 IPR044965 GO:0004553|GO:0005975
Cca02g01384 613 MobiDBLite consensus disorder prediction 540 590 - -
Cca02g01384 613 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Cca02g01384 613 SMART X8_cls 411 495 IPR012946 -
Cca02g01384 613 Gene3D - 406 509 - -
Cca02g01384 613 MobiDBLite consensus disorder prediction 508 539 - -
Cca02g01384 613 MobiDBLite consensus disorder prediction 287 303 - -
Cca02g01384 613 MobiDBLite consensus disorder prediction 365 402 - -
Cca02g01384 613 MobiDBLite consensus disorder prediction 280 308 - -
Cca02g01384 613 MobiDBLite consensus disorder prediction 495 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01384 Cca-Chr2 32333236 32336963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01384 385 498 Glycoside Hydrolase AT2G05790 50.427 9.49e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01384 - - gmx:100781884 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01384 02 32333236 32336963 Cca02g01384 02 32333236 32336963 ECH
Cca03g02679 03 48084313 48087747 Cca02g01384 02 32333236 32336963 PCT