Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01282 ATGGCAACAATAGCTGGTAGTGTGAGTCTTCCAAGTCCTAGCAGAGTAGTTGCGAAAGCAGGATCAGAAAAGGTCCGGGCCGTGAGGTTCCCAGCGCTATCAAGGCCCATTGAGAAGTGGCCCGGTTTGGTTGGGAAGTTTAGGGCCCGGCCCGTTATGGCAACGCCGGAAAAGATATCCTCAAAGGTGGAGGAGAGCATAAAGAGCGCGGAGGAGGCGTGCGCGGGAGGCGCCGATGCGGAATGCGCGGCGGCGTGGGATGAGGTGGAGGAGCTGAGCGCGGCGGCCAGCCACGCCAGGGACAAGCAGAAGCAGTCCGACCCTCTTGAAAACTACTGCAAGGACAACCCCGAGACCGACGAGTGCCGCACTTACGATAACTAG 384 0.5938 MATIAGSVSLPSPSRVVAKAGSEKVRAVRFPALSRPIEKWPGLVGKFRARPVMATPEKISSKVEESIKSAEEACAGGADAECAAAWDEVEELSAAASHARDKQKQSDPLENYCKDNPETDECRTYDN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01282 127 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 127 - -
Cca02g01282 127 MobiDBLite consensus disorder prediction 94 127 - -
Cca02g01282 127 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 127 IPR039314 -
Cca02g01282 127 Pfam CP12 domain 59 126 - -
Cca02g01282 127 SMART CP12_2 59 127 IPR003823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01282 Cca-Chr2 30956686 30957917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01282 - - gmx:100814289 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02770 03 49080656 49082325 Cca02g01282 02 30956686 30957917 PCT