Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01275 ATGGAAAAGAAAGATCAAAAGATTATGGTGGCTATAGATGAGAGCCAAGAAAGCATGTATGCTTTGTCTTGGTGCATCACAAATCTTATTTCTGATACCCCCACCAACAACAAGCTTGTTTTGCTTTATGTTAGGCCACCTTCTGCTTTCTACACCTTGGATGCCGCAGGGTATATCTTTAACACTGATGTTGTTGATGCTATGGAAAAGTACAGTATGCACTTGGCTAATTCAGTGATGGAAAGAGCTGAAGCTATTTGCAGAGACTTGAACGCTACTAATATTAATATGGAGAGGGTGGTTGGTATAGGAGATGCCAAGAATGTAATATGCAGAGCAGTGAAGAAACTAGAGGCTGACACCTTGGTCATGGGAACTCACGGCTATGGATTCTTTAAGAGGGCACTCCTTGGAAGTGTGAGTGATCACTGTGCCAAGCATGCGAATTGTCCAGTTGTAATCGTGAAACATCCTTGA 477 0.4214 MEKKDQKIMVAIDESQESMYALSWCITNLISDTPTNNKLVLLYVRPPSAFYTLDAAGYIFNTDVVDAMEKYSMHLANSVMERAEAICRDLNATNINMERVVGIGDAKNVICRAVKKLEADTLVMGTHGYGFFKRALLGSVSDHCAKHANCPVVIVKHP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01275 158 CDD USP_Like 7 155 - -
Cca02g01275 158 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 157 - -
Cca02g01275 158 Gene3D HUPs 1 158 IPR014729 -
Cca02g01275 158 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 157 - -
Cca02g01275 158 Pfam Universal stress protein family 6 156 IPR006016 -
Cca02g01275 158 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 157 - -
Cca02g01275 158 PRINTS Universal stress protein signature 5 23 IPR006015 -
Cca02g01275 158 PRINTS Universal stress protein signature 116 128 IPR006015 -
Cca02g01275 158 PRINTS Universal stress protein signature 134 156 IPR006015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01275 Cca-Chr2 30872651 30874267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01275 - - gmx:100306535 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01275 02 30872651 30874267 Cca02g01275 02 30872651 30874267 ECH
Cca02g01275 02 30872651 30874267 Cca03g02884 03 50162278 50163386 ECH