Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01262 ATGGAGCGAAAGGATGAAAACTCAATGATTCTTAGCATCGGCCAAAAACCAATGCCAATTACCCCTCATGATACTAATGATAATGATAATAATAAAACCACTCCTTCCCTCAAGAAGGGTAAGCGGTCCAAGAACATTTTCAAGGTGGCATTGTTCATGATGCGAGGGCGTTCGCGAAAAGCCAAAGCGCTCGCTGTGGATGACGAATCCAAGAGCATGTGGAGGAAGATCGTGGGGTCCATGAGGCCATTGCACCTACAAAGCATGCATTCTCCAACGCGCGATaacaacaacaacaacaacaaTATTATTCCTCAACCTAATAAAAAGATGATTACCTTACCGCTGTCCGAAAACGGCGACGAGGGGTTTGATTCTGCGTCGGAGTTTGTGAACTCGCCGTCTCCGTCTAGTAGCCGTTACGCCTCCGCGGTTGGGCTGAACGAAATGGTGCAAgaggaggaggagaaggtggaagaggttggtgttgagaaggagaatgatgatgaTATTGATGCGAAGGCTGAGGAGTTCATTGCTCAGTTTTACCACGAAATGAGGTTGCAGCGCTTGGATGTCATGGATCGTCATTACAAAGAGATAAGCATGAGGTCATTAGGCTTATACGATGGTGAACCATGA 642 0.4159 MERKDENSMILSIGQKPMPITPHDTNDNDNNKTTPSLKKGKRSKNIFKVALFMMRGRSRKAKALAVDDESKSMWRKIVGSMRPLHLQSMHSPTRDNNNNNNNIIPQPNKKMITLPLSENGDEGFDSASEFVNSPSPSSSRYASAVGLNEMVQEEEEKVEEVGVEKENDDDIDAKAEEFIAQFYHEMRLQRLDVMDRHYKEISMRSLGLYDGEP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01262 213 Pfam Cotton fibre expressed protein 168 200 IPR008480 -
Cca02g01262 213 MobiDBLite consensus disorder prediction 87 107 - -
Cca02g01262 213 PANTHER COTTON FIBER PROTEIN 1 203 - -
Cca02g01262 213 MobiDBLite consensus disorder prediction 19 33 - -
Cca02g01262 213 MobiDBLite consensus disorder prediction 1 39 - -
Cca02g01262 213 PANTHER COTTON FIBER PROTEIN 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01262 Cca-Chr2 30661403 30662635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01262 - - ccaj:109795496 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02789 03 49264348 49265300 Cca02g01262 02 30661403 30662635 PCT