Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01140 AGTGTGGAGCTGACAAGTGAAGCTGTAGAGTTTCTGAATGGTATCTTTCGATTGTTTGATATGGATAAAGATCGAGCCCTACGACCTGCTGAAGTTGATAAGCTATTTGATACTGCTCCGAAAAGTCCATGGAACGATGCTCCATATAAAGATGCAGCAGAGAAAACTGATATGGGCTATATATCTCTGAATGGATTTCTGTCTCAGTGGGCCCTTATGACATTACTTGATCCAACACGTAGTTTGGCTAATTTGATTTACATTGGATATAATGGTAATCCTGCTGCAGCACTCCATATCACTCCAACAATTAACTGTCATTTCCATAGGCCTTTCTCAAGTAATTATACTCCAACAACAGTTGAGCAGTATGCGGCAAATGTCATTGAACTAAAAAGGGCGAAGGTAACTAGGAAATTTCTCATATTGCGTGAGATACCCGAGGATGGATTATCAGATTTTTTGTCAAAACTGGATTTTTTGGCTGCATGTGACGTAGCTGTTTTCGTGTATGACAGTTCAGATGAATACTCATGGAAGAAATCCAAAGATTTGCTTGAGAAAGTTGTTAGACAAGGAGAAATAACTGGTTATACAACCCCTTGCCTCCTTATTGCTGCTAAGGATGATTTAACTCCATTCCCAAGGGCAATACTAGATTCAGTTAAGGTTACTCAGGAACTGGGAATAGAGGCACCTATTCACGTAAGTATGAAGTTAGGTGATACAAGTAATGTGTATAATAAAATTGTTAATGCTGCCGAACAGCCTCATTTGAGCATTCCAGAATCTGAGGTTGCACGGAAAAAGAAGCAGCACAATCAGCTTCTTCATCACTCTCTTATTTTTGCCTTAGTTGGGGCTGCTATGGCAGTTGCCGGTTTGACAGCTTATCGTGTGCGTTCAGTGAGGAAGAATACTACTGCTTAG 930 0.4032 SVELTSEAVEFLNGIFRLFDMDKDRALRPAEVDKLFDTAPKSPWNDAPYKDAAEKTDMGYISLNGFLSQWALMTLLDPTRSLANLIYIGYNGNPAAALHITPTINCHFHRPFSSNYTPTTVEQYAANVIELKRAKVTRKFLILREIPEDGLSDFLSKLDFLAACDVAVFVYDSSDEYSWKKSKDLLEKVVRQGEITGYTTPCLLIAAKDDLTPFPRAILDSVKVTQELGIEAPIHVSMKLGDTSNVYNKIVNAAEQPHLSIPESEVARKKKQHNQLLHHSLIFALVGAAMAVAGLTAYRVRSVRKNTTA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01140 309 Gene3D - 1 104 - -
Cca02g01140 309 Gene3D - 105 276 IPR027417 -
Cca02g01140 309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 260 IPR027417 -
Cca02g01140 309 Pfam EF hand associated 44 101 IPR013566 -
Cca02g01140 309 PANTHER RHO FAMILY GTPASE 2 101 IPR003578 GO:0005525|GO:0007264
Cca02g01140 309 PANTHER MITOCHONDRIAL RHO GTPASE 2 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01140 Cca-Chr2 28794159 28808978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01140 1 306 EF-hand Containing Proteins AT3G63150 50.000 3.37e-113 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01140 K07870 - gmx:100806983 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02106 03 41373212 41382367 Cca02g01140 02 28794159 28808978 PCT