Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01086 ATGCCTTTTCCGATGAAAATTCAGCCTATCGATTCTCAGGTACCGTCCGAGGGGGTTCGGCTTGAGCTGGCAAAGCCGGTTGTTAAGTCGCGGCTGAAGCGGCTCCTCGAGCGGCAATTCTCCGGCGTTCTGAGAAATTCGGCGCCGGAGAAGCTCTCCGGTGGCGAGGAACAGCATTTTTACAAGGATGGCGTTGGCGTCCACGGTTCCGGCGAATTCGAACCGAGCTCGGCGTGTCTGGCGAGAATGGTGCAGAGTTTCATCGAGGAGAGTCACGAGAAGAACTCCGCTTCGCACCGCAACCGCTGTAACTGCTTCAATAGGAGCTACGACGATAGCTCTGACGAAGACTCAAACTCGCTCAGCGACTCCAATTATTCCTCCGGCGAGGCGTGTGAAGCTCTCAAGGGCCTGGTAGCGTGTGCGAGCGTGCGGGAGAGGAATTTGCTCGCGGACACTGCGAAGATCGTTGAAAGGAACAAGATCTGCAAGCGCAAGGACAATTTCTGCAGAAAGCTTATCACGGAAGGATTATTATCCCTTGGATACGATGCTTCGATTTGCAAATCTCGCTGGGAGAAATCCCCCTCTTGTCCCGCTGGGGAATATGAATACATAGATGTAAGGACGGGGAAAGAGAGGTTTCTAATTGACATTGACTTTAGGTCAGAATTCGAGATTGCTCGGTCTACCAAAGCTTACAAAACGATTCTCCAGAACCTTCCGTACATATTCGTTGGCACGTGCGAGCGATTGCAGAGCATCGTAGCCATAGTCTCGGAGGCAGCGAAGCAGAGTCTGAAGAAGAAGGGAATGCATGTTCCGCCGTGGAGGAGAGCGGAATATGTGAAAGCCAAGTGGCTCTCTCCGTACACGCGAACTACTACTGCGCTCATGAAAGAGGAGAAGAAGGAAGAAGAACTAACTCTTTCCAAGGAAAACTGTGTCGCCGCCGAGTCAGCGAGTTCCGGTGAAGACAACAAGGCGGTGATAGAATGGAAGCCGCCGGAGCTGAAGCCCAAGGCTTCGCTGCCTGGCGTTAAGGTCGTGACTGGTTTGACAGTGGTGTTTCATGATGACGATAACCCATAG 1092 0.5256 MPFPMKIQPIDSQVPSEGVRLELAKPVVKSRLKRLLERQFSGVLRNSAPEKLSGGEEQHFYKDGVGVHGSGEFEPSSACLARMVQSFIEESHEKNSASHRNRCNCFNRSYDDSSDEDSNSLSDSNYSSGEACEALKGLVACASVRERNLLADTAKIVERNKICKRKDNFCRKLITEGLLSLGYDASICKSRWEKSPSCPAGEYEYIDVRTGKERFLIDIDFRSEFEIARSTKAYKTILQNLPYIFVGTCERLQSIVAIVSEAAKQSLKKKGMHVPPWRRAEYVKAKWLSPYTRTTTALMKEEKKEEELTLSKENCVAAESASSGEDNKAVIEWKPPELKPKASLPGVKVVTGLTVVFHDDDNP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01086 363 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 172 294 IPR006502 -
Cca02g01086 363 PANTHER OS03G0796600 PROTEIN 24 363 IPR006502 -
Cca02g01086 363 Pfam PDDEXK-like family of unknown function 82 293 IPR006502 -
Cca02g01086 363 PANTHER DUF506 FAMILY PROTEIN 24 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01086 Cca-Chr2 27935615 27937768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01086 - - gmx:100782749 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02163 03 42218387 42220727 Cca02g01086 02 27935615 27937768 PCT