Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01042 ATGGCCTTCGCTTCTTTCCTCGGCAGAGTCCTCTTCGCTTCCCTCTTCATACTCTCTGCTTACCAAGAATTTAATGAATATGGAGTTGATGGGGGACCTGCAGCGAAAGCACTCAGACCTAAGTTTGATGCCTTTACACATCGAGTGCATTCTCAAGTTGGCTTTCAACTTCCAGAGATTGATACGAAAATTTTAATTGCTGGGGCTATTGCTCTGAAGGGCCTTGGAGGGGTTCTTTTCATATTTGGCAGCTCTTTTGGAGCTCTCCTTCTGCTCCTGCATCAGCTGATTGCTACTCCAATCCATTATGATTTCTACAACTATGACAGTGAGGACAAAGAGTTTACTCAACTTTTCATCAAATTTACACAGAATATGGCTCTTTTTGGGGCTCTGTTGTTTTTCATTGGGATGAAAAACTCCATCCCTAAAAGGCAACCCAAGAAGGCTCCAAAAACAAAAACCTATTAG 471 0.4268 MAFASFLGRVLFASLFILSAYQEFNEYGVDGGPAAKALRPKFDAFTHRVHSQVGFQLPEIDTKILIAGAIALKGLGGVLFIFGSSFGALLLLLHQLIATPIHYDFYNYDSEDKEFTQLFIKFTQNMALFGALLFFIGMKNSIPKRQPKKAPKTKTY 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01042 156 Pfam HR-like lesion-inducing 1 138 IPR008637 -
Cca02g01042 156 PANTHER - 1 156 - -
Cca02g01042 156 PANTHER HR-LIKE LESION-INDUCING PROTEIN 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01042 Cca-Chr2 27217384 27219901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01042 - - gmx:100305592 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01042 02 27217384 27219901 Cca03g02193 03 42659397 42662976 PCT