Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01035 ATGTTTAACTGGGCAAGAGATGCTAGTGCTTTTAATGTATTCAACTGGAAAAGTCAAGGTGAATCATCTTTAACAACGGGATTACTTCAAGATGTTCCACTAGAGATTGAATTGTCAGATTATAGAAGGATCCCAAGTCCAGGTAGTGAGAGCCCTTCAGGGCTACTTAATGGTGAGAGCCTAAAAGTGGAACCCATTGCTGATTTGGATCTCTTCTTTGAAAGACTTTACAGTTACTACTGCGAGAAAGGGCTCTGGTGCATCATCATAAAGTGGATTGGTGAACTTTTGAGTCTCGGGTTCACCATATGTTTTTCAGGATTTTTCTTACTGTATGTCGACTGGAATGGGCTCCGTAATATAAAGTGTGGGACGGATGCAGTTGAATCTGGAAGGCAGCCTTGTGATCTTGCTAATGAAGCTCTTTATCAACACCCTTTAACTCCATTAACACTCAGCAGAGCTATTATTGTCGGATACTTGGGAATATTTTCTATATATTGGATATTTTGCTTCTTGAGATTCTTTGTTCAACTAAATGATACTTTGGAAATCCGAAAGTTTTACTACAATAGTCTCTGTGTTACTGATAATGAAATTCAAACCGTGCCCTGGGCTACTATTCTTGAAAAGGTTGTCGTTTTGCAAAGCTCACAACAACTCTGCGTGGTTAAGGATCTTTCTGCTCATGACATGGTGATGAGGTTGATGCGGAAGGAGAACTACTTGATTGGAATGCTCAACAAAGGTGTGCTTGCTTTCCCCATTTCACAGTGGGTCCCAGGTGCTGGACCAACAGTAAAATCTGGTACTAATGGAACACAATATCGCCTTATACTGCCCAAGACCCTTGAGTGGACTTTAAACTGGTGCATCCTGCAAAGCATGTTTGATCGAAAATTCTGTGTCAGAAGGGATTTTGTGTCAAATCCAAGGACATTAAAGAAAAGGCTTATGGTAGTTGGGATTGCGATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGTATATGTCTTTTTGAGACATGCGGAGCAATTTTATAATCACCCAAGCACAGCATCATTTCGAAGATGGTCAAACTTGTCACGCTGGGTCTTTAGGGAATTCAACGAGGTGGACCATCTCTTCAAGCATCGGCTCAATAGCAGTGTATTACATGCTTCTAACTATCTCAAGCAATTTCCTTCACCTATCATATCTATCATTGCAAAATTCATCGCATTTGTATCGGGTGGCTTTGCTGCGGTTCTGATAATCTTTGCTTTTCTAGAGGAATCTCTGCTGGAGGGTCATGTATATGGTAAAAAGTTGTTGTGGTATGCTGCTGTTTTTGGAACTATAACTGCTATTAGTCGGGCTGCGATCGCAGATGAGCTTCTAGTCATAGACCCTGAAGGAGCAATGTCATTGGTTGTTGAGCATACACATTATATGCCCAAGAGATGGCGGGGAAAAGAAAGTACTGAAATCGTCTGGATTGAGTTTGTCACCTTTTTCCAGTATAGTGGGAGGATGTTACTTGAGGAGATGACCTCGATTTTCCTTACTCCATACTTGCTTCTGTTGGTTGTCCCAAAGAGGGTTGATGATATCTTGAAGTTTATTGAAGATTTTACTGTGGATGTTGAAGGTGTTGGTCACGTTTGCAGTTTCAGTGTCTTTAATTTTCAAGAGCATGGAAACAGTAATTATGGTTCTCCATTTAATGCGCCTCGCAGCCAGAGAAGTTCCCAGGGGAAGTTGGAGAAATCATTTTTGAGCTTTCAGAGTAGTTACCCCTCATGGGAACCAAATGCTCAGGGGAAGCAGTTTATGCTAAATTTGAAAACATTCAGAGAGGAAAAGTTAGCAGGGCATCTAAACAGACATGGATTTTCCCCTCTTAGAATGTGGAGAGGCAGTCCCAACATGGGAAGCAATGTAGACAGAAACAGGTTTACATCATATAGTACTTTTGTGACTGGCAATCACTTGGGTTCATTGTTGCCAATTGAATCCAGTAATCAAAACAACCATCCCTATATTCTTGATTGGTACTACACTTCCCAACCTCATAATGCAACTCCAAGGCATGTTCCTTCAGATCCATTTGAAGTGACTGATCATCATTCCCCAGATTGGATGCCCTCAAACTTGACTCAAAATGAGCATCATGGGTATGGACTTTACACAAATGCGTACAGTGATGGGCGCACTGCATCCCCTCTCGGTGCTTCCACGACTGCTCCCATCTTCAGGGAAAGCCTTATTCAGGACCAACATTGCATTGATATGCCCCTCACTACCAGGAGCAATTGGTGGGCTAGAAGTCACCCCCAGAGTGGACAAGTTCAGGCAAGCTTTCTTGAGCCACCAGATTTCGATCACCAAACAGCATACAATAACCATGATACATTTTCTGATAGAGGGTCAGAGGATCAAGACCAAGATCAGGAACAACACTTGTTCTGGGGAAATGATCACAAATTATCTAGTACAGCACCTGTAGATGATTTAGATGCAGCAGATTTCAATCTTCATTTTGTTGATGTTTATAGCAGGCCTCCAGAAAATCCCACTGTAAATCCAAACACTTCAAGCTTTTGA 2592 0.4171 MFNWARDASAFNVFNWKSQGESSLTTGLLQDVPLEIELSDYRRIPSPGSESPSGLLNGESLKVEPIADLDLFFERLYSYYCEKGLWCIIIKWIGELLSLGFTICFSGFFLLYVDWNGLRNIKCGTDAVESGRQPCDLANEALYQHPLTPLTLSRAIIVGYLGIFSIYWIFCFLRFFVQLNDTLEIRKFYYNSLCVTDNEIQTVPWATILEKVVVLQSSQQLCVVKDLSAHDMVMRLMRKENYLIGMLNKGVLAFPISQWVPGAGPTVKSGTNGTQYRLILPKTLEWTLNWCILQSMFDRKFCVRRDFVSNPRTLKKRLMVVGIAMLLLSPFLVIFMLVYVFLRHAEQFYNHPSTASFRRWSNLSRWVFREFNEVDHLFKHRLNSSVLHASNYLKQFPSPIISIIAKFIAFVSGGFAAVLIIFAFLEESLLEGHVYGKKLLWYAAVFGTITAISRAAIADELLVIDPEGAMSLVVEHTHYMPKRWRGKESTEIVWIEFVTFFQYSGRMLLEEMTSIFLTPYLLLLVVPKRVDDILKFIEDFTVDVEGVGHVCSFSVFNFQEHGNSNYGSPFNAPRSQRSSQGKLEKSFLSFQSSYPSWEPNAQGKQFMLNLKTFREEKLAGHLNRHGFSPLRMWRGSPNMGSNVDRNRFTSYSTFVTGNHLGSLLPIESSNQNNHPYILDWYYTSQPHNATPRHVPSDPFEVTDHHSPDWMPSNLTQNEHHGYGLYTNAYSDGRTASPLGASTTAPIFRESLIQDQHCIDMPLTTRSNWWARSHPQSGQVQASFLEPPDFDHQTAYNNHDTFSDRGSEDQDQDQEQHLFWGNDHKLSSTAPVDDLDAADFNLHFVDVYSRPPENPTVNPNTSSF 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01035 863 MobiDBLite consensus disorder prediction 787 813 - -
Cca02g01035 863 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Cca02g01035 863 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 855 - -
Cca02g01035 863 PANTHER APG9 AUTOPHAGY 9 1 855 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01035 Cca-Chr2 27140272 27146985 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01035 K17907 - gmx:100779344 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01035 02 27140272 27146985 Cca02g01035 02 27140272 27146985 ECH
Cca03g02196 03 42695790 42701585 Cca02g01035 02 27140272 27146985 PCT