Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00879 ATGGCGGCCATCATAACCCGCCTCGCGAAGCGCGCCTCCACCGCGCCTCTCTCTCCCCTCGCCAGGAGATGCCTGATTTCGTGCCAAGTCAACTCTCACGCGCCGCCGCACGCCGCCGCGCGGTTTCCCACGCGCGAGGATCCGAGCGACAGGCGCGTGCAGTGGGTGTTCCTGGGCTGCCCCGGCGTCGGCAAAGGCACGTACGCTAGTCGCCTCTCCAGCCTCCTCGGAGTGCCTCACATCGCCACCGGCGATCTCGTTCGCGACGAACTCGCTTCCTCTGGCCCCCTTTCTTCTCAGCTATCAGAAATTGTAAAACAAGGTCAATTGGTGTCAGATGAAATAATTATAAATTTATTATCAAAGAGACTTGTTGCTGCCGAAGCTAAAGGCGAATTGGGATTTATTCTTGATGGTTTTCCTCGAACAATAAAGCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTAATCAATCTGAAGCTCCGAGAAGATGTTCTGCTTGAGAAATGCCTTGGTAGGAGAATTTGCAACCAGTGTGGGGGTAACTTTAATGTTGCTTCCATTGACATCAAGGCTGAGAATGGGAGCCCTGGAATGGTTATGGCTCCACTTCTTCCTCCTGTGAATTGTATGTCAAAGCTCATTACTCGATCAGATGATACTGAAGCAGTGGTCAAAGAAAGGCTTCGAATATACAATGAAATGACTCAGCCTGTGGAGGAATTTTACCGTAGAAGAGGGAAATTATTGGAGTTTAACCTGCCTGGAGGAATCCCGGAATCTTGGCCTAAGTTGCTACGAGCTCTTAATCTTGATGATTGTGAGGACAAGCGATCTGCTGCAGCTTAA 858 0.5035 MAAIITRLAKRASTAPLSPLARRCLISCQVNSHAPPHAAARFPTREDPSDRRVQWVFLGCPGVGKGTYASRLSSLLGVPHIATGDLVRDELASSGPLSSQLSEIVKQGQLVSDEIIINLLSKRLVAAEAKGELGFILDGFPRTIKQAEILEGVTDIDLVINLKLREDVLLEKCLGRRICNQCGGNFNVASIDIKAENGSPGMVMAPLLPPVNCMSKLITRSDDTEAVVKERLRIYNEMTQPVEEFYRRRGKLLEFNLPGGIPESWPKLLRALNLDDCEDKRSAAA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00879 285 PANTHER NUCLEOTIDE KINASE 2 285 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca02g00879 285 TIGRFAM adk: adenylate kinase 54 272 IPR006259 GO:0004017|GO:0005524|GO:0016776
Cca02g00879 285 PRINTS Adenylate kinase signature 56 69 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca02g00879 285 PRINTS Adenylate kinase signature 84 98 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca02g00879 285 PRINTS Adenylate kinase signature 135 151 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca02g00879 285 PRINTS Adenylate kinase signature 220 235 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca02g00879 285 PRINTS Adenylate kinase signature 237 251 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca02g00879 285 ProSitePatterns Adenylate kinase signature. 135 146 IPR033690 -
Cca02g00879 285 PANTHER ADENYLATE KINASE 2 285 - -
Cca02g00879 285 CDD ADK 54 256 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca02g00879 285 Pfam Adenylate kinase 58 250 - -
Cca02g00879 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 272 IPR027417 -
Cca02g00879 285 Hamap Adenylate kinase [adk]. 53 273 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca02g00879 285 Gene3D - 40 278 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00879 Cca-Chr2 24228326 24232793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00879 K00939 - gmx:100777619 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02336 03 44324877 44327165 Cca02g00879 02 24228326 24232793 PCT