Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00856 ATGGTATCACTagaaagatcaagaaagaaagttatgaaatggaagaaagTCATGGTGCATTTTTCTCTGTGTTTTGTGATGGGGTTCTTCACAGGCTTTGCTCCTATAGGTAAATCTTTATTTCACAACCATGTTGCTGCTTCAAATAGGTCAGAATTTGCACCACAACCTATTGAAGTGTCACACATGACAACGAATTTCAATAGAAGTTGGATAGCTCCAACACCAGAGGAAACATCAAAATTGCATGCAAAACTATTGCCCCAGTTGAAGCCTAGAAGGCCTATTATCATTGTAACTCCAACAAGCACAAAACCTCCCTTCCAAGCAGTGGTTTTGACAAGGTTGGCAAATACCATAAAGCTGGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGGGCAAACAGATTCTTCAAAACTTTCAGAGACACTTAGGAAGACTGGCATTATGTATAGGCTTTTGGTTTCCAAGGAAAACTTCACTGACTTGGAAGCTGAACTGAATCACCAGAGAAATCTTGCACTCAAGCACATTGTGCATCACAGGCTAAGTGGGATTGTTCACTTTGCTGAGCTTTCCAATGTTTATGATCTCGAATTCTTCCAACAACTAAGATATATTGAGGTATTTGGAACATGGCCAACTGCATTGTTAGCAGCAAATAGGAAGAAAGTGATAATAGAAGGACCTGTATGCGATTCTTCACAAGTCATAGGTTGGCATTTAAGGAATATGAACAATGAAACTGATACCATTATTCCTCCCATTCATATTTCAAGTTTTGCATTCAACAGTTCCATCCTTTGGGACCCTGAGAGATGGGGTCGCACTTCCTATCTTCAAGACACCTCTCAGAATTCCATCAAATTCGTGAAGCAAGTTGTTCTAGAGGATGAAGCAAAGTTGAAAGGAATTCCCCCAGAGGATTGTTCCAGAATCTTGCTTTGGCGTTTCAATTTTCATGGGCGTACCACTTCAAATCATAAAACTTTCACTACTGCATCAGATGGTATCCCAAAGTAA 1026 0.3889 MVSLERSRKKVMKWKKVMVHFSLCFVMGFFTGFAPIGKSLFHNHVAASNRSEFAPQPIEVSHMTTNFNRSWIAPTPEETSKLHAKLLPQLKPRRPIIIVTPTSTKPPFQAVVLTRLANTIKLVPQPLLWIVVEGQTDSSKLSETLRKTGIMYRLLVSKENFTDLEAELNHQRNLALKHIVHHRLSGIVHFAELSNVYDLEFFQQLRYIEVFGTWPTALLAANRKKVIIEGPVCDSSQVIGWHLRNMNNETDTIIPPIHISSFAFNSSILWDPERWGRTSYLQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSRILLWRFNFHGRTTSNHKTFTTASDGIPK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00856 341 CDD GlcAT-I 94 321 IPR005027 GO:0015018|GO:0016020
Cca02g00856 341 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 94 337 IPR029044 -
Cca02g00856 341 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 328 IPR005027 GO:0015018|GO:0016020
Cca02g00856 341 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 329 IPR029044 -
Cca02g00856 341 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 328 - -
Cca02g00856 341 Pfam Glycosyltransferase family 43 116 320 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00856 Cca-Chr2 23803063 23805997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00856 1 325 Glycosyltransferase AT2G37090 58.333 3.53e-142 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00856 K20869 - gmx:100782450 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00856 02 23803063 23805997 Cca02g00856 02 23803063 23805997 ECH
Cca03g02349 03 44470885 44473679 Cca02g00856 02 23803063 23805997 PCT