Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00783 ATGGGTTGGAATCTCCTCTTCTGGCTCCTCATTTGTTTCCCTGCCAACATTGCTCTTCTCGCCTCAACTTTCTACCAGGTTTTGATTCTGTCTGATTTGGAATCTGATTACATCAACCCTTTTGACGCTGCGTCACGGATAAACTACTTCGTCCTTCCCGAGTTCGTTGGGCAGGGAGCGTTGTGTGCTCTTTGCCTCTTCACTGGCCACTGGTTCATGTTTTTGCTCACAGTGCCTGTTACTTGCTACCATGTCATGCTGTATGTGAAAAGAGAGCATCTTATTGATGTTACTGAAGTGTTTAGGGTAATCAATGCTGAGAAGAAGCTTCGGATAGCCAAACTTGCTTTGTACTTAATAGTTCTTATTGTTACTATCTTCAGGCTTACATTAATCGGTGTCTACTATTTAGGCATCGAAGATGATGAAGACATAGGAAACCTTTGGCGATGA 453 0.4327 MGWNLLFWLLICFPANIALLASTFYQVLILSDLESDYINPFDAASRINYFVLPEFVGQGALCALCLFTGHWFMFLLTVPVTCYHVMLYVKREHLIDVTEVFRVINAEKKLRIAKLALYLIVLIVTIFRLTLIGVYYLGIEDDEDIGNLWR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00783 150 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Cca02g00783 150 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Cca02g00783 150 PANTHER CORNICHON-RELATED 2 130 - -
Cca02g00783 150 PANTHER PROTEIN CORNICHON 2 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00783 Cca-Chr2 20927874 20943294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00783 K20368 - gmx:100500341 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00783 02 20927874 20943294 Cca02g00783 02 20927874 20943294 ECH
Cca03g01999 03 40110947 40115338 Cca02g00783 02 20927874 20943294 PCT