Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00743 ATGGGAGGTGGTGGCCGAAGTTCTGTTGCTCCTAAGCAGAGAAATTCTGGGGAAGAAGCCAAGAAACGTGTCCCACATGGAAAGCCTCCGTTTAGTCTCAGCCAAGTGAAGAAGGCAATTCCACCGCACTGTTTTCAGCGTTCTGTGATTCGTTCATTTTCCTATGTCTTCTACGACCTTACCATAGCCTCATGTCTCGCCTACGTAGCAATAAATTACTTTTCTACCCTTCCCCACAACCTTTTCCTCTTGTCATGGCCCCTTTATTGGGCCATGCAAGGTTGCGTCCTAACCGGAGTTTGGGTCATTGCACACGAGTGTGGCCATCATGCTTTCAGCGATTACCAATGGCTCGATGACTTAGTGGGTCTCGTTCTCCATTCATTTCTTCTTGTTCCTTATTTTTCGTGGAAATATAGTCACCGTCGTCACCACTCCAACACGGGTTCCCTTGAGCGAGATGAAGTGTTTGTGCCAAAGAGAAAATCTGCATTGAGTTGGTACTCTAAGTACCTTAACAACCCACTAGGGAGAGTTCTCACACTTGCTGTTACTCTAACTCTTGGATGGCCTCTCTACTTGGCTTTCAACGTTTCAGGAAGGCCTTATGAGAGATTTGCATGCCACTATGACCCTTATGGCCCCATTTACACGGATCGTGAGAGGCTTCAAATTTATATATCCGATGCTGGAATTCTTGCTATGTGTTATGGGCTATACAAGGCTGTGATGTTGAAAGGCCTAGTTTGGGTTGTATGTGTTTATGGGGTGCCATTGCTAGTGGTTAATGGGTTTTTGGTGTTGATCACTTTCTTGCAACACACTCACCCTGGGGTTCCTCACTATGATTCCTCTGAGTGGGACTGGTTTAGAGGTGCTTTGGCCACTGTGGACAGAGATTATGGGATTTTGAATAAGGTTTTGCATAATATAACAGACACACATGTGGCACACCACTTGTTTTCTACGATGCCTCATTACCATGCTACGGAGGCCACCAAGGCTATAAGGCCAATTTTGGGAGATTACTATCACTTTGATGGGACTCCCATTTATAAGGCAATGTGGAGAGAGGCAAAGGAGTGCATGTATGTTGAGCCTGATGAAGAGTCTAAGGCCAAAGGTGTTTACTGGTACAAAAATAAGTTGTAA 1152 0.454 MGGGGRSSVAPKQRNSGEEAKKRVPHGKPPFSLSQVKKAIPPHCFQRSVIRSFSYVFYDLTIASCLAYVAINYFSTLPHNLFLLSWPLYWAMQGCVLTGVWVIAHECGHHAFSDYQWLDDLVGLVLHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKRKSALSWYSKYLNNPLGRVLTLAVTLTLGWPLYLAFNVSGRPYERFACHYDPYGPIYTDRERLQIYISDAGILAMCYGLYKAVMLKGLVWVVCVYGVPLLVVNGFLVLITFLQHTHPGVPHYDSSEWDWFRGALATVDRDYGILNKVLHNITDTHVAHHLFSTMPHYHATEATKAIRPILGDYYHFDGTPIYKAMWREAKECMYVEPDEESKAKGVYWYKNKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00743 383 MobiDBLite consensus disorder prediction 1 32 - -
Cca02g00743 383 Pfam Fatty acid desaturase 85 345 IPR005804 GO:0006629
Cca02g00743 383 PANTHER OLEATE HYDROXYLASE FAH12 1 383 - -
Cca02g00743 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 383 - -
Cca02g00743 383 CDD Delta12-FADS-like 47 329 - -
Cca02g00743 383 Pfam Domain of unknown function (DUF3474) 17 67 IPR021863 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00743 Cca-Chr2 18306704 18308647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00743 1 383 Lipid Metabolism Gene Families AT3G12120 75.196 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00743 K10256 - gmx:100780912 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00743 02 18306704 18308647 Cca02g00743 02 18306704 18308647 ECH
Cca03g02027 03 40435149 40438459 Cca02g00743 02 18306704 18308647 PCT