Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00728 ATGGCTCATGCCACCAAGTACATTCCCATGATCCACCTCAAGAGCCTCTTCTCCATTCACAAAACCACCAAAACACTCACCTTTGCCTATGTCTTTGCCTTTGCCTTTTTTGCTTTCACAGTTTTTTTGGCCTTCTATCCCTCTTCAAACACTTCATCTCCTTTGTTCACCAACATCTTCCCCACAACTTCCTACAAGTCCCAAGTCTCTTCCATTTTCTCTTTCTTCTTCAACACCACCACTTCATCTTCAAATTCCTCTAGTGCTTATGCCACCCTTCACTCCAACCCTTCTAGATCTACCAACACCACTTCTAAACCCCCTCAAAAGACATTCAAAACCACCCCTATtcaaaaccaaactcaaactaattcaaccacaaacAAGGCCAAACCACATGATCATGTTGTGAACAAGGAACCATCAAGTGGTAGCAATCGAACCCAAGTTGAAGCTAAGCCTCTAAAGAAGACTAATCAATCTTCAAGTGGTGTGGACCCTGCTCATAATTTTTCAGGGGCAAGTCACCATCAGAATTTGAGTTCTTTGGTGAATGGAGGGGACATGGAAAAGGGTGTTGTGCATGGTAATTACACGGTTTCCCCTTTGAAGAAACAGAACAGTGGGAACGATGAAAAGGGTTCAAGGGTGAAGGATGAAAAGATGGAGTCTTTGATCAAGTGTGATTTTTTTGATGGGGAATGGGTTAAGGATGATTCCTATCCCCTCTATGAACCTGGTTCTTGCAACCTGATCGATGAACAATTCGATTGTATCCAAAATGGAAGGCCTGATAAAGAATATCTGAAATATAAGTGGAAGCCAAATGGATGCAGCCTCCCAAGGTTGGATGGGCATAGAATGCTGGATTTGTTGAGAGGCAAGAGGCTTATTTTTGTTGGTGATTCCATCAATAGGAATATGTGGGAATCTCTAATTTGCATCCTTAGAAACTCTGTGAAAGACAAAAGCAGAGTCTATGAAGCAAATGGAAGAGTCCATTTTAGAGGGGAAGCCTCTTATTCATTCATATTCAAAGATTATAACTTCTCCGTGGAGCTTTTCGTGTCCCCATTCTTGGTTCAAGAATGGGAAGTTCAAGTCAATAATGGAACAAAGAAGGAAACACTTCGGCTTGATTTAGTTGGTAAATCTTCAAATCAATACAAAAATGCGGATATAATCATCTTCAACACTGGCCACTGGTGGACTCACGATAAAACTTCTAAAGGGAAGGACTATTACCAAGAGGGTAGTCATATCTATGATGAATTGAATGTTTTGGAGGCTTTTCGAAGGGCTATAACAACATGGAGCAGATGGATTGATGCCAACATTGATCCATCCAAGTCTATGGTCTTCTTCAGAGGCTATTCTGCTTCACATTTCAGTGGGGGGCAATGGAATTCTGGTGGACAATGTGACAGTGAAACTGTGCCTATAAAGAATGAGAAATACTTGAAGGAATACCCCCCTAAGATGAGGGTATTGGAAAAGGTTTTGAAGTATATGAAAACACATGTCACATACCTGAATGTAACTAAAATGACAGATTTCAGAAAAGATGGTCATCCCTCAATATATAGGAAGCAAAACCTCTCACCAGAGGAGAGAAAATCACCATTGAGATTCCAAGACTGTAGTCACTGGTGCCTCCCTGGTGTGCCTGATGCATGGAATGAGATTCTTTATGCTGAGCTTCTGTTGAGAAAGTATCAGAATCAGCATCAGCAGAAAAACAATAGGTAA 1749 0.4048 MAHATKYIPMIHLKSLFSIHKTTKTLTFAYVFAFAFFAFTVFLAFYPSSNTSSPLFTNIFPTTSYKSQVSSIFSFFFNTTTSSSNSSSAYATLHSNPSRSTNTTSKPPQKTFKTTPIQNQTQTNSTTNKAKPHDHVVNKEPSSGSNRTQVEAKPLKKTNQSSSGVDPAHNFSGASHHQNLSSLVNGGDMEKGVVHGNYTVSPLKKQNSGNDEKGSRVKDEKMESLIKCDFFDGEWVKDDSYPLYEPGSCNLIDEQFDCIQNGRPDKEYLKYKWKPNGCSLPRLDGHRMLDLLRGKRLIFVGDSINRNMWESLICILRNSVKDKSRVYEANGRVHFRGEASYSFIFKDYNFSVELFVSPFLVQEWEVQVNNGTKKETLRLDLVGKSSNQYKNADIIIFNTGHWWTHDKTSKGKDYYQEGSHIYDELNVLEAFRRAITTWSRWIDANIDPSKSMVFFRGYSASHFSGGQWNSGGQCDSETVPIKNEKYLKEYPPKMRVLEKVLKYMKTHVTYLNVTKMTDFRKDGHPSIYRKQNLSPEERKSPLRFQDCSHWCLPGVPDAWNEILYAELLLRKYQNQHQQKNNR 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00728 582 MobiDBLite consensus disorder prediction 88 194 - -
Cca02g00728 582 MobiDBLite consensus disorder prediction 88 131 - -
Cca02g00728 582 MobiDBLite consensus disorder prediction 141 185 - -
Cca02g00728 582 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 16 574 IPR029962 GO:0016413
Cca02g00728 582 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 280 565 IPR026057 GO:0016740
Cca02g00728 582 MobiDBLite consensus disorder prediction 199 218 - -
Cca02g00728 582 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 16 574 - -
Cca02g00728 582 Pfam PMR5 N terminal Domain 227 278 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00728 Cca-Chr2 17463158 17466791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00728 - - gmx:100778601 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00728 02 17463158 17466791 Cca02g00728 02 17463158 17466791 ECH
Cca03g02040 03 40574594 40578029 Cca02g00728 02 17463158 17466791 PCT